Pfam Domains mapped on to the structure: 2AGJ

No.	Chain ID	Pfam ID	Pfam Description	Linkout - Pfam	Linkout - CDD
1	L	PF13927	Immunoglobulin domain	PF13927	PF13927
2	L	PF13927	Immunoglobulin domain	PF13927	PF13927

Conserved Domain Database Superfamily Annotations: 2AGJ

No.	PDB ID	PSSM ID	CDD Accession	Superfamily Short Name	Linkout - CDD
1	2AGJ	212623	cl11960	Ig	superfamily - -
2	2AGJ	143186	cd04985	IgC_CH1 -	cl11960
3	2AGJ	212623	cl11960	Ig	superfamily - -
4	2AGJ	212623	cl11960	Ig	superfamily - -

Structural Details of PDB entry 2AGJ PDBid Chains Hinge Swapped Domain 2AGJ H,L H:105-109,L:95-98 H:2-104,L:1-94 Swapped-domain interface residues and interactions: Chains Residues H 41, 45, 46, 47, 49, 52, 54, 60, 61, 63, 96, 103, 104, 105, 106, 107, 108, 110, 112, L 33, 37, 39, 42, 43, 44, 45, 47, 50, 56, 57, 88, 92, 95, 96, 97, 99, 101, Non-swapped-domain interface residues and interactions: Chains Residues H 129, 130, 131, 132, 133, 134, 135, 142, 144, 148, 150, 172, 173, 174, 175, 176, 178, 180, 187, 189, 191, 218, L 117, 118, 119, 120, 122, 124, 125, 128, 132, 134, 136, 138, 139, 161, 163, 164, 165, 168, 175, 177, 179, 181, 208, 215,

Swapped domains are represented using trasperent spheres. Non-swapped part is represented using light color and cartoon representation. Hinge region is shown in yellow color.

Mutations in critical regions:

Chains	Hinge	Domain swapped interface	Non-swapped interface	Swapped Domain
H	No mutation	No mutation	No mutation	No mutation
L	No mutation	No mutation	No mutation	No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

H:2AGJ

JOY Structural annotation for hinge hinge and swapped domain:

Hinge	Swapped domain

JOY output:

ali file:	2AGJ.ali
atm file:	2AGJ.atm
cof file:	2AGJ.cof
hbd file:	2AGJ.hbd
pdb file:	2AGJ.pdb
psa file:	2AGJ.psa
sst file:	2AGJ.sst