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Pfam Domains mapped on to the structure: 2A9F

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00390 Malic enzyme, N-terminal domain PF00390 PF00390
2 A PF03949 Malic enzyme, NAD binding domain PF03949 PF03949

Gene Ontology Annotations: 2A9F

No. GO ID GO Description Linkout - AmiGO
1 GO:0055114 oxidation-reduction process GO:0055114

Conserved Domain Database Superfamily Annotations: 2A9F

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2A9F 133453 cd05311 NAD_bind_2_malic_enz - cl09931
2 2A9F 212616 cl09931 NADB_Rossmann superfamily - -
3 2A9F 201200 cl02855 malic superfamily - -
Structural Details of PDB entry 2A9F

Structural Details of PDB entry 2A9F

PDBid Chains Hinge Swapped Domain
2A9F A,B A:21-29,B:21-29;A:55-66,B:55-66 A:30-54,B:30-54

Swapped-domain interface residues and interactions:

Chains Residues
A 9, 11, 12, 30, 31, 33, 36, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 51, 52, 83, 87, 90, 91, 94,
B 6, 8, 9, 12, 30, 33, 34, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 78, 83, 87, 90, 91, 94, 95, 101,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 7, 14, 15, 16, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 55, 58, 60, 61, 62, 63, 65, 78, 80, 86, 89, 93, 95, 97, 98, 100, 101, 102, 106, 107, 108, 109, 110, 111, 112, 113, 119, 122, 123, 126, 127, 129, 130, 322, 366, 367, 388,
B 11, 13, 14, 15, 16, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 55, 58, 60, 61, 62, 63, 65, 80, 84, 86, 89, 93, 97, 98, 100, 102, 106, 107, 108, 109, 110, 111, 112, 113, 114, 119, 122, 123, 126, 127, 129, 130, 313, 318, 322, 366, 367,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2A9F B:2A9F

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2A9F.ali
atm file:2A9F.atm
cof file:2A9F.cof
hbd file:2A9F.hbd
html file:2A9F.html
pdb file:2A9F.pdb
ps file:2A9F.ps
psa file:2A9F.psa
rtf file:2A9F.rtf
sst file:2A9F.sst
tem file:2A9F.tem