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Pfam Domains mapped on to the structure: 2A4E

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00028 Cadherin domain PF00028 PF00028
2 A PF00028 Cadherin domain PF00028 PF00028

Conserved Domain Database Superfamily Annotations: 2A4E

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 2A4E 206637 cd11304 Cadherin_repeat - cl15786
2 2A4E 211469 cl15786 CA_like superfamily - -
3 2A4E 206637 cd11304 Cadherin_repeat - cl15786
4 2A4E 211469 cl15786 CA_like superfamily - -
Structural Details of PDB entry 2A4E

Structural Details of PDB entry 2A4E

PDBid Chains Hinge Swapped Domain
2A4E A,B A:-,B:- A:0-10,B:0-10

Swapped-domain interface residues and interactions:

Chains Residues
A 0, 1, 2, 3, 4, 5, 6, 7, 8, 10, 19, 22, 25, 27, 87,
B 0, 1, 2, 3, 4, 5, 6, 7, 8, 10, 19, 22, 25, 27, 87,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 13, 17, 18, 20, 23, 24, 56, 58, 75, 88, 90, 95, 97, 99, 100, 138, 207,
B 13, 17, 18, 20, 23, 24, 56, 58, 75, 88, 90, 95, 97, 99, 100, 138,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:2A4E B:2A4E

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:2A4E.ali
atm file:2A4E.atm
cof file:2A4E.cof
hbd file:2A4E.hbd
html file:2A4E.html
pdb file:2A4E.pdb
ps file:2A4E.ps
psa file:2A4E.psa
rtf file:2A4E.rtf
sst file:2A4E.sst
tem file:2A4E.tem