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Pfam Domains mapped on to the structure: 1YVW

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF03819 MazG nucleotide pyrophosphohydrolase domain PF03819 PF03819

Conserved Domain Database Superfamily Annotations: 1YVW

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1YVW 212141 cd11534 NTP-PPase_HisIE_like - cl16941
2 1YVW 212390 cl16941 NTP-PPase superfamily - -
Structural Details of PDB entry 1YVW

Structural Details of PDB entry 1YVW

PDBid Chains Hinge Swapped Domain
1YVW A,B A:83-86,B:83-86 A:87-95,B:87-95

Swapped-domain interface residues and interactions:

Chains Residues
A 4, 8, 61, 64, 87, 88, 89, 91, 92, 95,
B 4, 8, 61, 64, 87, 88, 89, 91, 92,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 5, 7, 11, 15, 25, 33, 34, 37, 40, 41, 44, 47, 48, 51, 52, 54, 56, 59, 60, 65, 66, 67, 68, 70, 71, 73, 74, 77, 78, 79, 83, 84,
B 5, 7, 11, 15, 25, 33, 34, 37, 40, 41, 44, 47, 48, 51, 52, 54, 56, 59, 60, 65, 66, 67, 68, 70, 71, 73, 74, 77, 78, 79, 83, 84,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1YVW B:1YVW

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1YVW.ali
atm file:1YVW.atm
cof file:1YVW.cof
hbd file:1YVW.hbd
html file:1YVW.html
pdb file:1YVW.pdb
ps file:1YVW.ps
psa file:1YVW.psa
rtf file:1YVW.rtf
sst file:1YVW.sst
tem file:1YVW.tem