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Pfam Domains mapped on to the structure: 1YUK

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00362 Integrin, beta chain PF00362 PF00362
2 B PF00362 Integrin, beta chain PF00362 PF00362

Conserved Domain Database Superfamily Annotations: 1YUK

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1YUK 206808 vWFA superfamily N -
Structural Details of PDB entry 1YUK

Structural Details of PDB entry 1YUK

PDBid Chains Hinge Swapped Domain
1YUK A,B A:86-91,B:406-417 A:92-99,B:418-462

Swapped-domain interface residues and interactions:

Chains Residues
A 11, 12, 15, 25, 27, 57, 59, 60, 81, 82, 83, 84, 85, 86, 92, 93, 94, 95, 96, 97, 98, 99,
B 384, 386, 387, 388, 389, 390, 391, 392, 393, 418, 419, 420, 421, 422, 423, 424, 425, 426, 427, 428, 436, 443, 445, 446, 447, 449, 457, 458,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 9, 10, 16, 23, 28, 30, 31, 32, 36, 39, 74, 75, 76, 78, 79, 80, 87, 88, 90, 91,
B 345, 347, 381, 394, 395, 396, 397, 398, 406, 408, 411, 413, 414, 415, 416, 417,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1YUK B:1YUK

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1YUK.ali
atm file:1YUK.atm
cof file:1YUK.cof
hbd file:1YUK.hbd
html file:1YUK.html
pdb file:1YUK.pdb
ps file:1YUK.ps
psa file:1YUK.psa
rtf file:1YUK.rtf
sst file:1YUK.sst
tem file:1YUK.tem