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Pfam Domains mapped on to the structure: 1YEP

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF08534 Redoxin PF08534 PF08534

Conserved Domain Database Superfamily Annotations: 1YEP

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1YEP 48564 cd03015 PRX_Typ2cys - cl00388
2 1YEP 212209 cl00388 Thioredoxin_like superfamily - -
3 1YEP 212209 cl00388 Thioredoxin_like superfamily - -
Structural Details of PDB entry 1YEP

Structural Details of PDB entry 1YEP

PDBid Chains Hinge Swapped Domain
1YEP A,B A:139-142,B:139-142 A:143-168,B:143-165

Swapped-domain interface residues and interactions:

Chains Residues
A 45, 139, 140, 143, 146, 149, 150, 153, 154, 157, 164, 165, 166, 167, 168,
B 44, 45, 46, 85, 139, 140, 143, 146, 149, 150, 153, 154, 157, 164,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 1, 3, 44, 46, 108, 118, 131, 132, 133, 134, 135, 136, 137, 138, 141,
B 1, 3, 4, 43, 48, 84, 108, 118, 131, 132, 133, 134, 135, 136, 137, 138, 141,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1YEP B:1YEP

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1YEP.ali
atm file:1YEP.atm
cof file:1YEP.cof
hbd file:1YEP.hbd
html file:1YEP.html
pdb file:1YEP.pdb
ps file:1YEP.ps
psa file:1YEP.psa
rtf file:1YEP.rtf
sst file:1YEP.sst
tem file:1YEP.tem