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Pfam Domains mapped on to the structure: 1Y94

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00074 Pancreatic ribonuclease PF00074 PF00074

Conserved Domain Database Superfamily Annotations: 1Y94

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1Y94 119387 cd06265 RNase_A_canonical - cl00128
2 1Y94 206850 cl00128 RNase_A superfamily - -
Structural Details of PDB entry 1Y94

Structural Details of PDB entry 1Y94

PDBid Chains Hinge Swapped Domain
1Y94 A,B A:16-22,B:16-22 A:1-15,B:1-15

Swapped-domain interface residues and interactions:

Chains Residues
A 4, 5, 8, 9, 10, 11, 12, 13, 14, 15, 33, 45, 46, 47, 48, 49, 50, 51, 116, 117, 118, 119,
B 4, 5, 8, 9, 10, 11, 12, 13, 14, 15, 33, 45, 46, 47, 48, 49, 50, 51, 116, 117, 118,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 16, 17, 19, 20, 22, 25, 28, 29, 31, 32, 34, 35, 41, 44, 54, 101, 120, 124,
B 19, 20, 22, 25, 28, 29, 31, 32, 34, 35, 37, 41, 44, 54, 80, 101, 120,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ASER(16)GLY, THR(17)ASN, ALA(19)PRO, ALA(20)SER, No mutationSER(16)GLY, THR(17)ASN, ALA(19)PRO, ALA(20)SER, No mutation
BSER(16)GLY, THR(17)ASN, ALA(19)PRO, ALA(20)SER, No mutationALA(19)PRO, ALA(20)SER, No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1Y94 B:1Y94

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1Y94.ali
atm file:1Y94.atm
cof file:1Y94.cof
hbd file:1Y94.hbd
html file:1Y94.html
pdb file:1Y94.pdb
ps file:1Y94.ps
psa file:1Y94.psa
rtf file:1Y94.rtf
sst file:1Y94.sst
tem file:1Y94.tem