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Pfam Domains mapped on to the structure: 1Y3I

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF01513 ATP-NAD kinase PF01513 PF01513

Conserved Domain Database Superfamily Annotations: 1Y3I

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1Y3I 207362 cl01255 DAGK_cat superfamily - -
2 1Y3I 207362 cl01255 DAGK_cat superfamily - -
Structural Details of PDB entry 1Y3I

Structural Details of PDB entry 1Y3I

PDBid Chains Hinge Swapped Domain
1Y3I A,B A:231-233,B:231-233 A:234-302,B:234-302

Swapped-domain interface residues and interactions:

Chains Residues
A 175, 178, 179, 181, 182, 183, 184, 185, 210, 211, 212, 214, 215, 234, 235, 236, 238, 288, 290, 291, 293, 299, 300, 301, 302,
B 178, 179, 181, 183, 184, 185, 209, 210, 211, 212, 214, 215, 234, 235, 236, 288, 290, 291, 293, 294, 299, 300, 301,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 204, 207, 208, 209, 217, 228, 229, 231, 232, 233,
B 182, 204, 207, 208, 217, 228, 229, 231, 232, 233,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1Y3I B:1Y3I

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1Y3I.ali
atm file:1Y3I.atm
cof file:1Y3I.cof
hbd file:1Y3I.hbd
html file:1Y3I.html
pdb file:1Y3I.pdb
ps file:1Y3I.ps
psa file:1Y3I.psa
rtf file:1Y3I.rtf
sst file:1Y3I.sst
tem file:1Y3I.tem