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Pfam Domains mapped on to the structure: 1XSD

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF03965 Penicillinase repressor PF03965 PF03965

Gene Ontology Annotations: 1XSD

No. GO ID GO Description Linkout - AmiGO
1 GO:0045892 negative regulation of transcription, DNA-dependent GO:0045892

Conserved Domain Database Superfamily Annotations: 1XSD

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1XSD 212173 cl00088 HTH superfamily - -
Structural Details of PDB entry 1XSD

Structural Details of PDB entry 1XSD

PDBid Chains Hinge Swapped Domain
1XSD A,B A:106-108,B:106-108 A:109-126,B:109-126

Swapped-domain interface residues and interactions:

Chains Residues
A 96, 110, 113, 114, 115, 116, 117, 119, 120, 121, 123, 124, 126,
B 96, 110, 113, 114, 115, 116, 117, 119, 120, 121, 123, 124,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 10, 13, 14, 17, 76, 77, 79, 80, 82, 83, 84, 85, 86, 87, 89, 90, 91, 95, 98, 99, 100, 101, 102, 103, 104, 105, 107, 108,
B 10, 13, 14, 17, 76, 77, 79, 80, 82, 83, 84, 85, 86, 87, 89, 90, 91, 95, 98, 99, 100, 101, 102, 103, 104, 105, 107, 108,

Swapped domains are represented using trasperent spheres.
Non-swapped part is reprented using light color and cartoon reprentation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo Jmol_logo

2D-plot:

3:1XSD A:1XSD B:1XSD

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1XSD.ali
atm file:1XSD.atm
cof file:1XSD.cof
hbd file:1XSD.hbd
html file:1XSD.html
pdb file:1XSD.pdb
ps file:1XSD.ps
psa file:1XSD.psa
rtf file:1XSD.rtf
sst file:1XSD.sst
tem file:1XSD.tem