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Pfam Domains mapped on to the structure: 1XNF

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF13371 Tetratricopeptide repeat PF13371 PF13371
2 A PF13371 Tetratricopeptide repeat PF13371 PF13371
3 A PF07719 Tetratricopeptide repeat PF07719 PF07719
4 A PF07719 Tetratricopeptide repeat PF07719 PF07719
5 A PF07719 Tetratricopeptide repeat PF07719 PF07719
6 A PF13414 TPR repeat PF13414 PF13414

Conserved Domain Database Superfamily Annotations: 1XNF

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1XNF 29151 cd00189 TPR - cl02429
2 1XNF 207591 cl02429 TPR superfamily - -
3 1XNF 207591 cl02429 TPR superfamily - -
Structural Details of PDB entry 1XNF

Structural Details of PDB entry 1XNF

PDBid Chains Hinge Swapped Domain
1XNF A,B A:36-38,B:36-38 A:26-35,B:26-35

Swapped-domain interface residues and interactions:

Chains Residues
A 26, 27, 29, 30, 31, 32, 33, 35, 252, 255, 256, 258, 261, 262,
B 26, 30, 31, 32, 33, 35, 251, 254, 255, 258, 261, 262,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 36, 38, 41, 44, 45, 48, 52, 68, 72, 75, 76, 77, 78, 79, 80, 83, 87, 212, 237, 240, 259, 264, 275, 278, 284,
B 23, 24, 25, 36, 38, 41, 44, 45, 48, 49, 52, 68, 72, 76, 77, 78, 79, 80, 83, 259, 264, 275, 278,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1XNF B:1XNF

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1XNF.ali
atm file:1XNF.atm
cof file:1XNF.cof
hbd file:1XNF.hbd
html file:1XNF.html
pdb file:1XNF.pdb
ps file:1XNF.ps
psa file:1XNF.psa
rtf file:1XNF.rtf
sst file:1XNF.sst
tem file:1XNF.tem