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Pfam Domains mapped on to the structure: 1WZ3

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF04110 Ubiquitin-like autophagy protein Apg12 PF04110 PF04110

Gene Ontology Annotations: 1WZ3

No. GO ID GO Description Linkout - AmiGO
1 GO:0005737 cytoplasm GO:0005737

Conserved Domain Database Superfamily Annotations: 1WZ3

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1WZ3 176356 cd01612 APG12_C - cl00155
2 1WZ3 212176 cl00155 UBQ superfamily - -
Structural Details of PDB entry 1WZ3

Structural Details of PDB entry 1WZ3

PDBid Chains Hinge Swapped Domain
1WZ3 A,B A:59-62,B:59-62 A:63-93,B:63-93

Swapped-domain interface residues and interactions:

Chains Residues
A 12, 13, 14, 15, 16, 17, 18, 19, 20, 22, 34, 35, 36, 37, 38, 39, 54, 55, 56, 57, 58, 60, 63, 64, 66, 67, 68, 69, 70, 71, 73, 74, 76, 77, 78, 79, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 93,
B 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 34, 35, 36, 37, 38, 39, 54, 55, 56, 57, 58, 63, 64, 66, 67, 68, 69, 70, 71, 73, 74, 77, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 10, 23, 25, 32, 41, 42, 45, 49, 59, 61, 62,
B 32, 41, 42, 45, 59, 60, 61, 62,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1WZ3 B:1WZ3

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1WZ3.ali
atm file:1WZ3.atm
cof file:1WZ3.cof
hbd file:1WZ3.hbd
html file:1WZ3.html
pdb file:1WZ3.pdb
ps file:1WZ3.ps
psa file:1WZ3.psa
rtf file:1WZ3.rtf
sst file:1WZ3.sst
tem file:1WZ3.tem