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Pfam Domains mapped on to the structure: 1WWB

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 X PF13895 Immunoglobulin domain PF13895 PF13895

Conserved Domain Database Superfamily Annotations: 1WWB

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1WWB 143263 cd05855 Ig_TrkB_d5 - cl11960
2 1WWB 212623 cl11960 Ig superfamily - -
Structural Details of PDB entry 1WWB

Structural Details of PDB entry 1WWB

PDBid Chains Hinge Swapped Domain
1WWB A,C,X,B A:297-301,C:297-301,X:297-301,B:297-301 A:283-296,C:283-296,X:283-296,B:283-296

Swapped-domain interface residues and interactions:

Chains Residues
A 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 363, 365, 367, 368, 370, 372, 374, 375, 376,
B 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 363, 365, 367, 368, 370, 372, 374, 375, 376,
C 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 363, 365, 367, 368, 370, 372, 374, 375, 376,
X 283, 284, 285, 286, 287, 288, 289, 290, 291, 292, 293, 294, 295, 296, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311, 363, 365, 367, 368, 370, 372, 374, 375, 376,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 297, 298, 299, 300, 326, 327, 328, 331, 332, 335, 336, 337, 338, 339, 340, 341, 343, 344, 345, 361, 385,
B 297, 298, 299, 300, 326, 327, 328, 331, 332, 335, 336, 337, 338, 339, 340, 341, 343, 344, 345, 361, 385,
C 297, 298, 299, 300, 326, 327, 328, 331, 332, 335, 336, 337, 338, 339, 340, 341, 343, 344, 345, 361,
X 297, 298, 299, 300, 326, 327, 328, 331, 332, 335, 336, 337, 338, 339, 340, 341, 343, 344, 345, 361, 385,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
CNo mutationNo mutationNo mutationNo mutation
XNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1WWB B:1WWB C:1WWB X:1WWB

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1WWB.ali
atm file:1WWB.atm
cof file:1WWB.cof
hbd file:1WWB.hbd
html file:1WWB.html
pdb file:1WWB.pdb
ps file:1WWB.ps
psa file:1WWB.psa
rtf file:1WWB.rtf
sst file:1WWB.sst
tem file:1WWB.tem