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Pfam Domains mapped on to the structure: 1WEJ

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 L PF13895 Immunoglobulin domain PF13895 PF13895
2 L PF13927 Immunoglobulin domain PF13927 PF13927
3 L PF00047 Immunoglobulin domain PF00047 PF00047
4 H PF13895 Immunoglobulin domain PF13895 PF13895
5 F PF13442 Cytochrome C oxidase, cbb3-type, subunit III PF13442 PF13442
6 F PF00034 Cytochrome c PF00034 PF00034

Conserved Domain Database Superfamily Annotations: 1WEJ

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1WEJ 212313 cl11414 Cytochrom_C superfamily - -
Structural Details of PDB entry 1WEJ

Structural Details of PDB entry 1WEJ

PDBid Chains Hinge Swapped Domain
1WEJ H,L H:103-108,L:94-99 H:1-102,L:1-93

Swapped-domain interface residues and interactions:

Chains Residues
H 35, 39, 42, 44, 45, 47, 59, 60, 61, 62, 95, 99, 100, 101, 102, 103, 105, 107,
L 1, 32, 36, 38, 40, 43, 44, 46, 49, 50, 56, 87, 89, 91, 94, 95, 96, 97, 98, 100,

Non-swapped-domain interface residues and interactions:

Chains Residues
H 108, 126, 127, 128, 129, 130, 141, 145, 147, 165, 168, 169, 170, 171, 173, 175, 180, 182, 184, 212, 217, 219,
L 114, 116, 118, 119, 121, 123, 124, 127, 131, 133, 135, 137, 138, 158, 159, 160, 161, 162, 163, 164, 165, 167, 169, 174, 176, 178, 180, 214,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
HASN(103)GLN, PHE(104)GLU, ASP(105)PRO, ASP(100)GLY, TYR(101)SER, GLY(102)SER, ASN(103)GLN, ASP(105)PRO, THR(182)SER, GLN(3)LYS, GLN(5)LEU, GLN(6)GLU, PRO(14)SER, LYS(43)GLN, SER(55)ASN, ASN(57)GLU, THR(58)ILE, ASP(66)GLY, LYS(67)THR, SER(76)THR, ALA(97)ARG, -(98)ARG, ASP(100)GLY, TYR(101)SER, GLY(102)SER,
LNo mutationGLN(89)HIS, PHE(118)LEU, SER(85)THR, GLN(89)HIS,

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

H:1WEJ

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1WEJ.ali
atm file:1WEJ.atm
cof file:1WEJ.cof
hbd file:1WEJ.hbd
html file:1WEJ.html
pdb file:1WEJ.pdb
ps file:1WEJ.ps
psa file:1WEJ.psa
rtf file:1WEJ.rtf
sst file:1WEJ.sst
tem file:1WEJ.tem