Conserved Domain Database Superfamily Annotations: 1VRR

No.	PDB ID	PSSM ID	CDD Accession	Superfamily Short Name	Linkout - CDD
1	1VRR	204164	cl07716	Endonuc-BglII	superfamily - -

Structural Details of PDB entry 1VRR PDBid Chains Hinge Swapped Domain 1VRR A,B A:83-85,B:83-85 A:1-82,B:1-82 Swapped-domain interface residues and interactions: Chains Residues A 5, 7, 80, 82, 178, 179, 182, B 5, 7, 80, 82, 178, 179, 182, Non-swapped-domain interface residues and interactions: Chains Residues A 83, 84, 86, 89, 90, 93, 112, 114, 116, 133, 134, 135, 136, 138, 139, 142, 143, 146, 147, 150, 164, 176, 181, 183, 185, 186, 187, 188, 189, 203, B 83, 84, 86, 89, 90, 93, 112, 114, 116, 133, 134, 135, 136, 138, 139, 142, 143, 146, 147, 150, 164, 176, 181, 183, 185, 186, 187, 188, 189,

Swapped domains are represented using trasperent spheres. Non-swapped part is represented using light color and cartoon representation. Hinge region is shown in yellow color.

Mutations in critical regions:

Chains	Hinge	Domain swapped interface	Non-swapped interface	Swapped Domain
A	No mutation	No mutation	No mutation	No mutation
B	No mutation	No mutation	No mutation	No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

A:1VRR

B:1VRR

JOY Structural annotation for hinge hinge and swapped domain:

Hinge	Swapped domain

JOY output:

ali file:	1VRR.ali
atm file:	1VRR.atm
cof file:	1VRR.cof
hbd file:	1VRR.hbd
html file:	1VRR.html
pdb file:	1VRR.pdb
ps file:	1VRR.ps
psa file:	1VRR.psa
rtf file:	1VRR.rtf
sst file:	1VRR.sst
tem file:	1VRR.tem