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Pfam Domains mapped on to the structure: 1VJ5

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF13419 Haloacid dehalogenase-like hydrolase PF13419 PF13419
2 A PF12695 Alpha/beta hydrolase family PF12695 PF12695
3 A PF12697 Alpha/beta hydrolase family PF12697 PF12697
4 A PF00561 alpha/beta hydrolase fold PF00561 PF00561

Conserved Domain Database Superfamily Annotations: 1VJ5

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1VJ5 119389 HAD_like N cl11391
2 1VJ5 212620 HAD_like superfamily N -
3 1VJ5 211462 Esterase_lipase superfamily NC -
4 1VJ5 211462 Esterase_lipase superfamily NC -
5 1VJ5 211462 Esterase_lipase superfamily NC -
6 1VJ5 211462 Esterase_lipase superfamily NC -
Structural Details of PDB entry 1VJ5

Structural Details of PDB entry 1VJ5

PDBid Chains Hinge Swapped Domain
1VJ5 A,B A:219-234,B:219-234 A:2-218,B:2-218

Swapped-domain interface residues and interactions:

Chains Residues

Non-swapped-domain interface residues and interactions:

Chains Residues
A 547,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1VJ5 B:1VJ5

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1VJ5.ali
atm file:1VJ5.atm
cof file:1VJ5.cof
hbd file:1VJ5.hbd
html file:1VJ5.html
pdb file:1VJ5.pdb
ps file:1VJ5.ps
psa file:1VJ5.psa
rtf file:1VJ5.rtf
sst file:1VJ5.sst
tem file:1VJ5.tem