Pfam Domains mapped on to the structure: 1VHZ
No.
Chain ID
Pfam ID
Pfam Description
Linkout - Pfam
Linkout - CDD
1
A
PF00293
NUDIX domain
PF00293
PF00293
Conserved Domain Database Superfamily Annotations: 1VHZ
Structural Details of PDB entry 1VHZ
Structural Details of PDB entry 1VHZ
PDBid
Chains
Hinge
Swapped Domain
1VHZ
A,B
A:45-47,B:45-47
A:2-44,B:2-44
Swapped-domain interface residues and interactions:
Chains
Residues
A
5 , 6 , 7 , 8 , 10 , 16 , 17 , 18 , 19 , 20 , 21 , 22 , 24 , 29 , 31 , 32 , 33 , 35 , 37 , 38 , 39 , 40 , 41 , 42 , 44 , 68 , 69 , 72 , 142 ,
B
5 , 6 , 7 , 8 , 10 , 16 , 17 , 18 , 19 , 20 , 21 , 22 , 24 , 29 , 31 , 32 , 33 , 35 , 37 , 38 , 39 , 40 , 41 , 42 , 44 , 69 , 142 ,
Non-swapped-domain interface residues and interactions:
Chains
Residues
A
64 , 66 , 67 , 70 , 71 , 73 , 74 , 111 , 113 , 114 , 115 , 116 , 117 , 118 , 119 , 120 , 121 , 123 , 140 , 143 , 144 , 146 , 159 , 165 , 166 , 167 , 168 , 170 , 171 , 174 , 175 , 177 , 178 , 185 ,
B
64 , 66 , 67 , 68 , 70 , 71 , 72 , 73 , 74 , 111 , 113 , 114 , 115 , 116 , 117 , 118 , 119 , 120 , 121 , 123 , 140 , 143 , 144 , 146 , 159 , 165 , 166 , 167 , 168 , 170 , 171 , 174 , 175 , 177 , 178 ,
Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.
Mutations in critical regions:
Chains
Hinge
Domain swapped interface
Non-swapped interface
Swapped Domain
A No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output: