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Pfam Domains mapped on to the structure: 1VH6

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF02561 Flagellar protein FliS PF02561 PF02561

Gene Ontology Annotations: 1VH6

No. GO ID GO Description Linkout - AmiGO
1 GO:0009288 bacterial-type flagellum GO:0009288

Conserved Domain Database Superfamily Annotations: 1VH6

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1VH6 207152 cl00654 FliS superfamily - -
Structural Details of PDB entry 1VH6

Structural Details of PDB entry 1VH6

PDBid Chains Hinge Swapped Domain
1VH6 A,B A:75-79,B:75-79 A:80-119,B:80-122

Swapped-domain interface residues and interactions:

Chains Residues
A 20, 21, 25, 28, 32, 35, 39, 42, 51, 54, 58, 61, 65, 82, 83, 86, 89, 90, 93, 96, 98, 101, 104, 105, 108, 109, 111, 112, 115, 116, 119,
B 21, 25, 28, 32, 35, 39, 42, 51, 54, 58, 61, 65, 82, 83, 86, 89, 90, 93, 96, 98, 101, 104, 105, 108, 109, 111, 112, 115, 116, 119,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 18, 19, 23, 24, 27, 29, 31, 36, 43, 50, 52, 55, 56, 59, 62, 63, 64, 66, 67, 68, 71, 72, 74, 75, 76, 79,
B 15, 16, 18, 19, 20, 23, 24, 27, 29, 31, 36, 43, 50, 59, 62, 63, 64, 66, 67, 68, 69, 71, 72, 74, 75, 76, 79,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1VH6 B:1VH6

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1VH6.ali
atm file:1VH6.atm
cof file:1VH6.cof
hbd file:1VH6.hbd
html file:1VH6.html
pdb file:1VH6.pdb
ps file:1VH6.ps
psa file:1VH6.psa
rtf file:1VH6.rtf
sst file:1VH6.sst
tem file:1VH6.tem