Pfam Domains mapped on to the structure: 1VDD

No.	Chain ID	Pfam ID	Pfam Description	Linkout - Pfam	Linkout - CDD
1	A	PF02132	RecR protein	PF02132	PF02132
2	A	PF13662	Toprim domain	PF13662	PF13662
3	A	PF01751	Toprim domain	PF01751	PF01751

Conserved Domain Database Superfamily Annotations: 1VDD

No.	PDB ID	PSSM ID	CDD Accession	Superfamily Short Name	Linkout - CDD
1	1VDD	173775	cd01025	TOPRIM_recR -	cl00718
2	1VDD	207177	cl00718	TOPRIM	superfamily - -
3	1VDD	202123	cl03461	RecR	superfamily - -
4	1VDD	202123	cl03461	RecR	superfamily - -

Structural Details of PDB entry 1VDD PDBid Chains Hinge Swapped Domain 1VDD A,B A:168-175,B:168-175 A:176-199,B:176-300 Swapped-domain interface residues and interactions: Chains Residues A 179, 180, 183, 199, Non-swapped-domain interface residues and interactions: Chains Residues A 23, 26, 27, D 23, 26, 27, 179, 180,

Swapped domains are represented using trasperent spheres. Non-swapped part is represented using light color and cartoon representation. Hinge region is shown in yellow color.

Mutations in critical regions:

Chains	Hinge	Domain swapped interface	Non-swapped interface	Swapped Domain
A	No mutation	No mutation	No mutation	No mutation
B	No mutation	No mutation	No mutation	No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

A:1VDD

D:1VDD

JOY Structural annotation for hinge hinge and swapped domain:

Hinge	Swapped domain

JOY output:

ali file:	1VDD.ali
atm file:	1VDD.atm
cof file:	1VDD.cof
hbd file:	1VDD.hbd
html file:	1VDD.html
pdb file:	1VDD.pdb
ps file:	1VDD.ps
psa file:	1VDD.psa
rtf file:	1VDD.rtf
sst file:	1VDD.sst
tem file:	1VDD.tem