Pfam Domains mapped on to the structure: 1V8B
Conserved Domain Database Superfamily Annotations: 1V8B
Structural Details of PDB entry 1V8B
Structural Details of PDB entry 1V8B
PDBid
Chains
Hinge
Swapped Domain
1V8B
A,B
A:450-458,B:450-458
A:459-479,B:459-479
Swapped-domain interface residues and interactions:
Chains
Residues
A
289 , 322 , 323 , 459 , 460 , 463 , 464 , 465 , 472 , 473 , 474 , 475 , 476 , 477 , 478 ,
B
289 , 322 , 323 , 459 , 460 , 463 , 464 , 465 , 472 , 473 , 474 , 475 , 476 , 477 , 478 ,
Non-swapped-domain interface residues and interactions:
Chains
Residues
A
206 , 209 , 210 , 226 , 228 , 231 , 232 , 233 , 237 , 240 , 266 , 267 , 270 , 286 , 287 , 288 , 290 , 291 , 292 , 293 , 294 , 295 , 297 , 298 , 299 , 302 , 303 , 304 , 305 , 308 , 321 , 324 , 327 , 345 , 401 , 402 , 405 , 432 , 439 , 442 , 443 , 446 , 449 , 450 , 451 , 452 , 453 , 454 , 456 , 457 ,
B
206 , 209 , 210 , 226 , 228 , 231 , 232 , 233 , 237 , 240 , 266 , 267 , 270 , 286 , 287 , 288 , 290 , 291 , 292 , 293 , 294 , 295 , 297 , 298 , 299 , 303 , 304 , 305 , 308 , 321 , 324 , 327 , 345 , 401 , 402 , 405 , 432 , 439 , 442 , 443 , 446 , 449 , 450 , 451 , 452 , 453 , 454 , 456 , 457 ,
Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.
Mutations in critical regions:
Chains
Hinge
Domain swapped interface
Non-swapped interface
Swapped Domain
A No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output: