Home BrowseSearch Help Group

Pfam Domains mapped on to the structure: 1V84

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF03360 Glycosyltransferase family 43 PF03360 PF03360

Gene Ontology Annotations: 1V84

No. GO ID GO Description Linkout - AmiGO
1 GO:0016020 membrane GO:0016020

Conserved Domain Database Superfamily Annotations: 1V84

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1V84 132995 cd00218 GlcAT-I - cl11394
2 1V84 212311 cl11394 Glyco_tranf_GTA_type superfamily - -
Structural Details of PDB entry 1V84

Structural Details of PDB entry 1V84

PDBid Chains Hinge Swapped Domain
1V84 A,B A:313-315,B:313-315 A:316-334,B:316-334

Swapped-domain interface residues and interactions:

Chains Residues
A 221, 224, 225, 226, 244, 317, 318, 319, 321, 322, 327, 328, 329, 330, 332, 333, 334,
B 221, 224, 225, 226, 244, 307, 317, 318, 319, 321, 322, 327, 328, 329, 330, 332, 333,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 96, 97, 99, 100, 103, 104, 107, 108, 110, 111, 199, 201, 202, 223, 227, 242, 243, 305, 307, 310, 312, 313, 314, 315,
B 97, 99, 100, 103, 104, 107, 108, 110, 111, 199, 201, 202, 223, 227, 242, 243, 305, 310, 312, 313, 314, 315,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1V84 B:1V84

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1V84.ali
atm file:1V84.atm
cof file:1V84.cof
hbd file:1V84.hbd
html file:1V84.html
pdb file:1V84.pdb
ps file:1V84.ps
psa file:1V84.psa
rtf file:1V84.rtf
sst file:1V84.sst
tem file:1V84.tem