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Pfam Domains mapped on to the structure: 1V1Q

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00436 Single-strand binding protein family PF00436 PF00436

Conserved Domain Database Superfamily Annotations: 1V1Q

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1V1Q 72968 cd04496 SSB_OBF - cl09930
2 1V1Q 209097 cl09930 RPA_2b-aaRSs_OBF_like superfamily - -
Structural Details of PDB entry 1V1Q

Structural Details of PDB entry 1V1Q

PDBid Chains Hinge Swapped Domain
1V1Q A,B A:002-4,B:002-4 A:4-1,B:4-1

Swapped-domain interface residues and interactions:

Chains Residues

Non-swapped-domain interface residues and interactions:

Chains Residues
A 2, 1, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 24, 33, 34, 35, 36, 37, 38, 39, 40, 41, 44, 45, 46, 47, 48, 49, 50, 55, 56, 71, 77, 78, 79, 80, 82, 85, 86, 87, 88, 90, 93, 95, 100,
B 7, 4, 2, 1, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 33, 34, 35, 36, 37, 38, 39, 40, 42, 44, 46, 47, 48, 49, 51, 55, 56, 58, 71, 77, 78, 79, 80, 81, 82, 87, 88, 89, 90, 93, 95, 100,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1V1Q B:1V1Q

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1V1Q.ali
atm file:1V1Q.atm
cof file:1V1Q.cof
hbd file:1V1Q.hbd
pdb file:1V1Q.pdb
psa file:1V1Q.psa
sst file:1V1Q.sst