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Pfam Domains mapped on to the structure: 1UKM

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00059 Lectin C-type domain PF00059 PF00059
2 B PF00059 Lectin C-type domain PF00059 PF00059

Conserved Domain Database Superfamily Annotations: 1UKM

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1UKM 207592 cl02432 CLECT superfamily - -
Structural Details of PDB entry 1UKM

Structural Details of PDB entry 1UKM

PDBid Chains Hinge Swapped Domain
1UKM A,B A:75-80,B:75-80 A:81-101,B:81-101

Swapped-domain interface residues and interactions:

Chains Residues
A 45, 46, 81, 82, 83, 85, 86, 87, 89, 91, 93, 94, 95, 96, 97, 98, 100, 115, 116, 117,
B 37, 40, 42, 43, 66, 67, 68, 70, 71, 72, 73, 74, 81, 82, 84, 86, 88, 89, 90, 91, 106, 107, 108,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 29, 40, 43, 44, 47, 71, 72, 73, 74, 75, 76, 80, 102, 103, 105, 118, 133,
B 41, 44, 47, 75, 76, 77, 78, 79, 80, 104, 105, 109,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationSER(43)GLY, No mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1UKM B:1UKM

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1UKM.ali
atm file:1UKM.atm
cof file:1UKM.cof
hbd file:1UKM.hbd
html file:1UKM.html
pdb file:1UKM.pdb
ps file:1UKM.ps
psa file:1UKM.psa
rtf file:1UKM.rtf
sst file:1UKM.sst
tem file:1UKM.tem