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Pfam Domains mapped on to the structure: 1UJ3

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF13895 Immunoglobulin domain PF13895 PF13895
2 A PF13895 Immunoglobulin domain PF13895 PF13895
3 A PF13927 Immunoglobulin domain PF13927 PF13927
4 A PF13927 Immunoglobulin domain PF13927 PF13927
5 C PF01108 Tissue factor PF01108 PF01108

Conserved Domain Database Superfamily Annotations: 1UJ3

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1UJ3 206813 FN3 superfamily N -
2 1UJ3 206813 cl00065 FN3 superfamily - -
Structural Details of PDB entry 1UJ3

Structural Details of PDB entry 1UJ3

PDBid Chains Hinge Swapped Domain
1UJ3 A,B A:40-45,B:341-346 A:1-39,B:301-340

Swapped-domain interface residues and interactions:

Chains Residues
A 1, 32, 36, 38,
B 335, 337, 339, 402,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 42, 43, 44, 46, 49, 50, 87, 89, 91, 94, 95, 96, 98, 100, 116, 117, 118, 119, 121, 123, 124, 129, 131, 133, 135, 137, 138, 160, 161, 162, 163, 164, 167, 174, 176, 178, 180, 209, 214,
B 344, 345, 347, 359, 361, 362, 395, 399, 401, 403, 404, 405, 407, 409, 426, 427, 428, 429, 430, 431, 439, 441, 445, 447, 468, 470, 471, 473, 474, 475, 483, 485, 487, 513,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1UJ3 B:1UJ3

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1UJ3.ali
atm file:1UJ3.atm
cof file:1UJ3.cof
hbd file:1UJ3.hbd
html file:1UJ3.html
pdb file:1UJ3.pdb
ps file:1UJ3.ps
psa file:1UJ3.psa
rtf file:1UJ3.rtf
sst file:1UJ3.sst
tem file:1UJ3.tem