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Pfam Domains mapped on to the structure: 1U2W

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF12840 Helix-turn-helix domain PF12840 PF12840
2 A PF01022 Bacterial regulatory protein, arsR family PF01022 PF01022

Conserved Domain Database Superfamily Annotations: 1U2W

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1U2W 28974 cd00090 HTH_ARSR - cl00088
2 1U2W 212173 cl00088 HTH superfamily - -
Structural Details of PDB entry 1U2W

Structural Details of PDB entry 1U2W

PDBid Chains Hinge Swapped Domain
1U2W A,D,C,B A:40-43,D:40-43,C:40-43,B:40-43 A:11-39,D:11-39,C:11-39,B:11-39

Swapped-domain interface residues and interactions:

Chains Residues
A 12, 14, 16, 17, 19, 20, 21, 23, 24, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 39, 40, 42, 45, 46, 50, 61, 64, 65, 111, 112, 115,
B 12, 13, 14, 16, 17, 19, 20, 21, 23, 24, 27, 28, 29, 31, 32, 33, 35, 36, 37, 39, 40, 41, 42, 45, 46, 50, 61, 64, 65, 111, 112, 115,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 49, 53, 54, 57, 58, 60, 83, 84, 101, 103, 104, 106, 107, 108, 110, 113, 114, 116, 117, 119,
B 49, 53, 54, 57, 58, 60, 83, 84, 87, 101, 103, 106, 107, 108, 110, 113, 114,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationGLY(11)CYS,
DNo mutationNo mutationNo mutationGLY(11)CYS,
CNo mutationNo mutationNo mutationGLY(11)CYS,
BNo mutationNo mutationNo mutationGLY(11)CYS,

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1U2W B:1U2W C:1U2W D:1U2W

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1U2W.ali
atm file:1U2W.atm
cof file:1U2W.cof
hbd file:1U2W.hbd
html file:1U2W.html
pdb file:1U2W.pdb
ps file:1U2W.ps
psa file:1U2W.psa
rtf file:1U2W.rtf
sst file:1U2W.sst
tem file:1U2W.tem