Pfam Domains mapped on to the structure: 1T98
No.
Chain ID
Pfam ID
Pfam Description
Linkout - Pfam
Linkout - CDD
1
A
PF03882
KicB killing factor
PF03882
PF03882
Gene Ontology Annotations: 1T98
Conserved Domain Database Superfamily Annotations: 1T98
No.
PDB ID
PSSM ID
CDD Accession
Superfamily Short Name
Linkout - CDD
1
1T98
187055
KicB
superfamily
C -
Structural Details of PDB entry 1T98
Structural Details of PDB entry 1T98
PDBid
Chains
Hinge
Swapped Domain
1T98
A,B
A:19-21,B:19-21
A:8-18,B:5-18
Swapped-domain interface residues and interactions:
Chains
Residues
A
8 , 9 , 11 , 12 , 14 , 15 , 16 , 26 , 30 , 34 , 58 , 59 , 62 ,
B
5 , 7 , 8 , 9 , 11 , 12 , 14 , 15 , 16 , 26 , 30 , 58 , 59 , 62 ,
Non-swapped-domain interface residues and interactions:
Chains
Residues
A
19 , 20 , 21 , 22 , 24 , 29 , 33 , 37 , 38 , 39 , 40 , 42 , 43 , 45 , 46 , 55 , 63 , 64 , 82 , 85 , 88 , 89 , 90 , 91 , 102 , 103 , 104 , 105 , 106 , 108 , 109 , 110 , 113 , 114 , 115 , 116 , 119 , 121 , 123 , 124 , 128 , 131 , 135 , 153 , 154 , 158 , 161 , 162 , 163 , 165 , 166 , 169 , 170 , 172 , 173 , 176 , 177 , 179 , 180 , 183 , 186 , 262 , 265 , 266 , 269 , 273 , 281 ,
B
19 , 20 , 21 , 22 , 24 , 29 , 33 , 34 , 37 , 39 , 40 , 41 , 42 , 43 , 44 , 46 , 63 , 85 , 88 , 89 , 90 , 91 , 100 , 102 , 103 , 104 , 105 , 106 , 108 , 109 , 110 , 113 , 114 , 115 , 116 , 117 , 118 , 119 , 121 , 123 , 124 , 126 , 128 , 131 , 135 , 153 , 154 , 158 , 161 , 162 , 163 , 166 , 167 , 169 , 170 , 172 , 173 , 176 , 177 , 179 , 180 , 182 , 183 , 184 , 186 , 187 , 258 , 259 , 262 , 265 , 266 , 273 ,
Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.
Mutations in critical regions:
Chains
Hinge
Domain swapped interface
Non-swapped interface
Swapped Domain
A No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output: