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Pfam Domains mapped on to the structure: 1T2Q

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 L PF13927 Immunoglobulin domain PF13927 PF13927
2 L PF00047 Immunoglobulin domain PF00047 PF00047

Conserved Domain Database Superfamily Annotations: 1T2Q

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1T2Q 143182 cd04981 IgV_H - cl11960
2 1T2Q 212623 cl11960 Ig superfamily - -
3 1T2Q 212623 cl11960 Ig superfamily - -
4 1T2Q 212623 cl11960 Ig superfamily - -
Structural Details of PDB entry 1T2Q

Structural Details of PDB entry 1T2Q

PDBid Chains Hinge Swapped Domain
1T2Q H,L H:43-47,L:47-51 H:1-42,L:2-46

Swapped-domain interface residues and interactions:

Chains Residues
H 36, 40, 103, 104, 105,
L 38, 40, 42, 44,

Non-swapped-domain interface residues and interactions:

Chains Residues
H 45, 46, 48, 59, 61, 62, 95, 100, 102, 106, 107, 109, 110, 128, 129, 130, 131, 132, 133, 134, 143, 145, 147, 149, 170, 171, 172, 173, 175, 176, 177, 184, 186, 214, 219,
L 49, 50, 52, 55, 56, 61, 93, 95, 97, 100, 101, 102, 104, 120, 122, 123, 124, 125, 126, 127, 129, 130, 133, 137, 139, 141, 143, 144, 166, 167, 168, 169, 170, 173, 180, 182, 184, 186, 218,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
HNo mutationNo mutationNo mutationNo mutation
LNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

H:1T2Q

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1T2Q.ali
atm file:1T2Q.atm
cof file:1T2Q.cof
hbd file:1T2Q.hbd
html file:1T2Q.html
pdb file:1T2Q.pdb
ps file:1T2Q.ps
psa file:1T2Q.psa
rtf file:1T2Q.rtf
sst file:1T2Q.sst
tem file:1T2Q.tem