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Pfam Domains mapped on to the structure: 1SYL

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00692 dUTPase PF00692 PF00692

Conserved Domain Database Superfamily Annotations: 1SYL

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1SYL 143638 cd07557 trimeric_dUTPase - cl00493
2 1SYL 207077 cl00493 trimeric_dUTPase superfamily - -
Structural Details of PDB entry 1SYL

Structural Details of PDB entry 1SYL

PDBid Chains Hinge Swapped Domain
1SYL A,B A:125-130,B:125-130 A:131-137,B:131-137

Swapped-domain interface residues and interactions:

Chains Residues
A 131, 132, 133, 134, 136, 137,
B 4, 5, 6, 7, 8, 131, 132, 133, 134, 136, 137,
C 4, 5, 6, 7, 8,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 1, 2, 3, 4, 5, 6, 7, 8, 9, 20, 21, 23, 25, 26, 27, 28, 29, 31, 46, 48, 50, 56, 57, 58, 62, 63, 64, 65, 67, 69, 70, 72, 75, 76, 81, 83, 84, 85, 86, 88, 90, 91, 92, 94, 100, 102, 104, 106, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130,
B 1, 2, 3, 9, 20, 21, 23, 25, 26, 27, 28, 29, 31, 46, 48, 50, 56, 57, 58, 62, 63, 64, 65, 67, 69, 70, 72, 75, 76, 81, 83, 84, 85, 86, 88, 90, 91, 92, 94, 100, 102, 104, 106, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130,
C 1, 2, 3, 9, 20, 21, 23, 25, 26, 27, 28, 29, 31, 46, 48, 50, 56, 57, 58, 62, 63, 64, 65, 67, 69, 70, 72, 75, 76, 81, 83, 84, 85, 86, 88, 90, 91, 92, 94, 100, 102, 104, 106, 119, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 136,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1SYL C:1SYL

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1SYL.ali
atm file:1SYL.atm
cof file:1SYL.cof
hbd file:1SYL.hbd
html file:1SYL.html
pdb file:1SYL.pdb
ps file:1SYL.ps
psa file:1SYL.psa
rtf file:1SYL.rtf
sst file:1SYL.sst
tem file:1SYL.tem