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Pfam Domains mapped on to the structure: 1SNF

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD

1 A PF00692 dUTPase PF00692 PF00692

Conserved Domain Database Superfamily Annotations: 1SNF

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD

1 1SNF 143638 cd07557 trimeric_dUTPase - cl00493

2 1SNF 207077 cl00493 trimeric_dUTPase superfamily - -

Structural Details of PDB entry 1SNF

Structural Details of PDB entry 1SNF

PDBid Chains Hinge Swapped Domain

1SNF A,B A:119-125,B:119-125 A:126-132,B:126-136

Swapped-domain interface residues and interactions:

Chains Residues
A 6, 7, 8, 126, 127, 128, 129, 130, 132,

B 126, 127, 128, 129, 130, 135, 136,

C 6, 7, 8,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 2, 3, 4, 5, 9, 16, 17, 19, 22, 23, 24, 25, 27, 40, 41, 42, 44, 50, 52, 55, 57, 58, 60, 62, 63, 65, 68, 69, 72, 74, 76, 77, 78, 79, 81, 83, 84, 85, 87, 93, 95, 97, 98, 99, 113, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125,

B 2, 3, 4, 5, 6, 7, 8, 9, 16, 17, 19, 22, 23, 24, 25, 27, 40, 41, 42, 44, 52, 55, 57, 58, 60, 62, 63, 65, 68, 69, 72, 74, 76, 77, 78, 79, 81, 83, 84, 85, 87, 93, 95, 97, 98, 99, 113, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125,

C 2, 3, 4, 5, 9, 16, 17, 19, 22, 23, 24, 25, 27, 40, 41, 42, 44, 50, 52, 55, 57, 58, 60, 62, 63, 65, 68, 69, 72, 74, 76, 77, 78, 79, 81, 83, 84, 85, 87, 93, 95, 97, 98, 99, 113, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain

A No mutation No mutation No mutation No mutation

B No mutation No mutation No mutation No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

A:1SNF C:1SNF

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file: 1SNF.ali
atm file: 1SNF.atm
cof file: 1SNF.cof
hbd file: 1SNF.hbd
html file: 1SNF.html
pdb file: 1SNF.pdb
ps file: 1SNF.ps
psa file: 1SNF.psa
rtf file: 1SNF.rtf
sst file: 1SNF.sst
tem file: 1SNF.tem