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Pfam Domains mapped on to the structure: 1SCE

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF01111 Cyclin-dependent kinase regulatory subunit PF01111 PF01111

Conserved Domain Database Superfamily Annotations: 1SCE

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1SCE 198805 cl03104 CKS superfamily - -
Structural Details of PDB entry 1SCE

Structural Details of PDB entry 1SCE

PDBid Chains Hinge Swapped Domain
1SCE A,D,C,B A:87-90,D:88-93,C:88-93,B:87-90 A:91-102,D:94-102,C:94-102,B:91-102

Swapped-domain interface residues and interactions:

Chains Residues
A 35, 36, 37, 38, 39, 40, 41, 42, 43, 81, 82, 83, 84, 85, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102,
B 35, 36, 37, 38, 39, 40, 41, 42, 43, 81, 82, 83, 84, 85, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102,
C 35, 36, 37, 39, 40, 41, 42, 43, 45, 61, 62, 63, 81, 82, 83, 84, 85, 94, 95, 96, 97, 98, 99, 100, 101,
D 35, 36, 37, 38, 39, 40, 41, 42, 43, 45, 48, 61, 62, 63, 81, 82, 83, 84, 85, 94, 95, 96, 97, 98, 99, 100, 101, 102,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 12, 15, 19, 22, 23, 25, 26, 27, 29, 30, 31, 32, 33, 34, 45, 48, 60, 61, 62, 63, 75, 76, 77, 78, 79, 80, 87, 89, 90,
B 12, 22, 23, 25, 26, 27, 29, 30, 32, 33, 45, 48, 61, 62, 63, 75, 76, 77, 78, 79, 80, 87, 89, 90,
C 32, 34, 48, 60, 76, 78, 79, 80, 87, 88, 89, 90, 92, 93, 104, 112,
D 30, 76, 78, 79, 87, 89, 90, 92, 93, 104,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
DNo mutationNo mutationNo mutationNo mutation
CNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1SCE B:1SCE C:1SCE D:1SCE

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1SCE.ali
atm file:1SCE.atm
cof file:1SCE.cof
hbd file:1SCE.hbd
html file:1SCE.html
pdb file:1SCE.pdb
ps file:1SCE.ps
psa file:1SCE.psa
rtf file:1SCE.rtf
sst file:1SCE.sst
tem file:1SCE.tem