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Pfam Domains mapped on to the structure: 1SB2

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00059 Lectin C-type domain PF00059 PF00059
2 B PF00059 Lectin C-type domain PF00059 PF00059

Conserved Domain Database Superfamily Annotations: 1SB2

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1SB2 207592 cl02432 CLECT superfamily - -
Structural Details of PDB entry 1SB2

Structural Details of PDB entry 1SB2

PDBid Chains Hinge Swapped Domain
1SB2 A,B A:76-80,B:76-80;A:94-98,B:94-98 A:81-93,B:81-93

Swapped-domain interface residues and interactions:

Chains Residues
A 38, 43, 44, 81, 82, 83, 84, 85, 87, 90, 91, 93, 113, 114, 115,
B 40, 43, 44, 45, 46, 71, 72, 73, 74, 75, 81, 83, 85, 86, 87, 89, 90, 91, 109, 110,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 27, 41, 42, 45, 48, 69, 70, 72, 79, 80, 94, 95, 96, 103, 111, 132,
B 29, 47, 50, 77, 78, 79, 80, 94, 99, 108, 111, 112,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1SB2 B:1SB2

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1SB2.ali
atm file:1SB2.atm
cof file:1SB2.cof
hbd file:1SB2.hbd
html file:1SB2.html
pdb file:1SB2.pdb
ps file:1SB2.ps
psa file:1SB2.psa
rtf file:1SB2.rtf
sst file:1SB2.sst
tem file:1SB2.tem