Pfam Domains mapped on to the structure: 1RJL

No.	Chain ID	Pfam ID	Pfam Description	Linkout - Pfam	Linkout - CDD
1	A	PF13895	Immunoglobulin domain	PF13895	PF13895
2	A	PF13927	Immunoglobulin domain	PF13927	PF13927
3	A	PF00047	Immunoglobulin domain	PF00047	PF00047
4	B	PF13895	Immunoglobulin domain	PF13895	PF13895
5	C	PF00820	Borrelia lipoprotein	PF00820	PF00820

Gene Ontology Annotations: 1RJL

No.	GO ID	GO Description	Linkout - AmiGO
1	GO:0009279	cell outer membrane	GO:0009279

Structural Details of PDB entry 1RJL PDBid Chains Hinge Swapped Domain 1RJL A,B A:93-97,B:102-108 A:1-92,B:1-101 Swapped-domain interface residues and interactions: Chains Residues A 32, 34, 36, 38, 43, 44, 46, 49, 50, 55, 56, 87, 89, 91, 95, 96, 98, 100, B 39, 44, 45, 47, 50, 59, 61, 62, 95, 99, 104, 106, 108, 112, Non-swapped-domain interface residues and interactions: Chains Residues A 94, 116, 117, 118, 119, 120, 121, 123, 124, 127, 131, 133, 135, 137, 138, 160, 161, 162, 163, 164, 167, 174, 176, 178, 180, 209, 212, B 103, 105, 107, 110, 111, 129, 130, 131, 132, 133, 134, 135, 144, 146, 148, 150, 171, 172, 173, 174, 176, 178, 183, 185, 187, 215, 220,

Swapped domains are represented using trasperent spheres. Non-swapped part is represented using light color and cartoon representation. Hinge region is shown in yellow color.

Mutations in critical regions:

Chains	Hinge	Domain swapped interface	Non-swapped interface	Swapped Domain
A	No mutation	No mutation	No mutation	No mutation
B	No mutation	No mutation	No mutation	No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

A:1RJL

B:1RJL

JOY Structural annotation for hinge hinge and swapped domain:

Hinge	Swapped domain

JOY output:

ali file:	1RJL.ali
atm file:	1RJL.atm
cof file:	1RJL.cof
hbd file:	1RJL.hbd
html file:	1RJL.html
pdb file:	1RJL.pdb
ps file:	1RJL.ps
psa file:	1RJL.psa
rtf file:	1RJL.rtf
sst file:	1RJL.sst
tem file:	1RJL.tem