Pfam Domains mapped on to the structure: 1QE0
No.
Chain ID
Pfam ID
Pfam Description
Linkout - Pfam
Linkout - CDD
1
A
PF03129
Anticodon binding domain
PF03129
PF03129
Conserved Domain Database Superfamily Annotations: 1QE0
Structural Details of PDB entry 1QE0
Structural Details of PDB entry 1QE0
PDBid
Chains
Hinge
Swapped Domain
1QE0
A,B
A:322-331,B:322-331
A:332-420,B:332-419
Swapped-domain interface residues and interactions:
Chains
Residues
A
31 , 32 , 33 , 34 , 99 , 134 , 136 , 138 , 139 , 244 , 245 , 342 , 343 , 346 , 347 , 350 , 353 , 354 , 356 , 358 , 359 , 360 , 363 , 364 , 365 , 366 , 374 , 377 , 378 , 420 ,
B
31 , 32 , 33 , 34 , 99 , 134 , 139 , 244 , 245 , 342 , 343 , 346 , 347 , 350 , 353 , 354 , 356 , 358 , 359 , 360 , 363 , 364 , 365 , 366 , 374 , 377 , 378 ,
Non-swapped-domain interface residues and interactions:
Chains
Residues
A
1 , 2 , 3 , 4 , 5 , 6 , 8 , 9 , 10 , 11 , 12 , 13 , 16 , 20 , 23 , 24 , 27 , 36 , 37 , 38 , 39 , 40 , 41 , 42 , 43 , 44 , 45 , 48 , 51 , 65 , 66 , 67 , 69 , 70 , 71 , 73 , 75 , 77 , 87 , 90 , 91 , 92 , 93 , 94 , 98 , 100 , 101 , 103 , 104 , 109 , 111 , 113 , 122 , 123 , 133 , 141 , 142 , 145 , 149 , 152 , 237 , 241 , 296 , 297 , 328 , 330 ,
B
1 , 2 , 3 , 4 , 5 , 6 , 8 , 9 , 10 , 11 , 12 , 13 , 16 , 20 , 23 , 24 , 27 , 36 , 37 , 38 , 39 , 41 , 42 , 43 , 44 , 45 , 48 , 51 , 65 , 66 , 67 , 69 , 70 , 71 , 73 , 75 , 77 , 87 , 90 , 91 , 92 , 93 , 94 , 98 , 100 , 101 , 103 , 104 , 111 , 113 , 122 , 123 , 133 , 136 , 138 , 142 , 145 , 149 , 152 , 237 , 241 , 296 , 297 , 328 , 330 ,
Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.
Mutations in critical regions:
Chains
Hinge
Domain swapped interface
Non-swapped interface
Swapped Domain
A No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output: