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Pfam Domains mapped on to the structure: 1QE0

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF03129 Anticodon binding domain PF03129 PF03129

Conserved Domain Database Superfamily Annotations: 1QE0

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1QE0 73226 cd00773 HisRS-like_core - cl00268
2 1QE0 206944 cl00268 class_II_aaRS-like_core superfamily - -
3 1QE0 29799 cd00859 HisRS_anticodon - cl00266
4 1QE0 206943 cl00266 HGTP_anticodon superfamily - -
5 1QE0 206943 cl00266 HGTP_anticodon superfamily - -
Structural Details of PDB entry 1QE0

Structural Details of PDB entry 1QE0

PDBid Chains Hinge Swapped Domain
1QE0 A,B A:322-331,B:322-331 A:332-420,B:332-419

Swapped-domain interface residues and interactions:

Chains Residues
A 31, 32, 33, 34, 99, 134, 136, 138, 139, 244, 245, 342, 343, 346, 347, 350, 353, 354, 356, 358, 359, 360, 363, 364, 365, 366, 374, 377, 378, 420,
B 31, 32, 33, 34, 99, 134, 139, 244, 245, 342, 343, 346, 347, 350, 353, 354, 356, 358, 359, 360, 363, 364, 365, 366, 374, 377, 378,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 16, 20, 23, 24, 27, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 48, 51, 65, 66, 67, 69, 70, 71, 73, 75, 77, 87, 90, 91, 92, 93, 94, 98, 100, 101, 103, 104, 109, 111, 113, 122, 123, 133, 141, 142, 145, 149, 152, 237, 241, 296, 297, 328, 330,
B 1, 2, 3, 4, 5, 6, 8, 9, 10, 11, 12, 13, 16, 20, 23, 24, 27, 36, 37, 38, 39, 41, 42, 43, 44, 45, 48, 51, 65, 66, 67, 69, 70, 71, 73, 75, 77, 87, 90, 91, 92, 93, 94, 98, 100, 101, 103, 104, 111, 113, 122, 123, 133, 136, 138, 142, 145, 149, 152, 237, 241, 296, 297, 328, 330,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1QE0 B:1QE0

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1QE0.ali
atm file:1QE0.atm
cof file:1QE0.cof
hbd file:1QE0.hbd
html file:1QE0.html
pdb file:1QE0.pdb
ps file:1QE0.ps
psa file:1QE0.psa
rtf file:1QE0.rtf
sst file:1QE0.sst
tem file:1QE0.tem