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Pfam Domains mapped on to the structure: 1QBL

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 L PF13895 Immunoglobulin domain PF13895 PF13895
2 L PF13927 Immunoglobulin domain PF13927 PF13927
3 L PF00047 Immunoglobulin domain PF00047 PF00047
4 H PF13895 Immunoglobulin domain PF13895 PF13895

Conserved Domain Database Superfamily Annotations: 1QBL

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1QBL 143182 cd04981 IgV_H - cl11960
2 1QBL 212623 cl11960 Ig superfamily - -
3 1QBL 212623 cl11960 Ig superfamily - -
4 1QBL 212623 cl11960 Ig superfamily - -
Structural Details of PDB entry 1QBL

Structural Details of PDB entry 1QBL

PDBid Chains Hinge Swapped Domain
1QBL H,L H:103-108,L:94-99 H:1-102,L:1-93

Swapped-domain interface residues and interactions:

Chains Residues
H 35, 39, 42, 44, 45, 47, 59, 60, 61, 62, 95, 99, 100, 101, 102, 103, 105, 107, 108,
L 32, 36, 38, 43, 44, 46, 49, 50, 56, 87, 89, 91, 94, 95, 96, 97, 98, 100,

Non-swapped-domain interface residues and interactions:

Chains Residues
H 126, 127, 128, 129, 130, 131, 133, 134, 141, 145, 147, 168, 169, 170, 171, 173, 175, 180, 182, 184, 212, 217, 218,
L 114, 116, 117, 118, 119, 121, 123, 124, 127, 131, 133, 135, 137, 138, 158, 159, 160, 161, 162, 163, 164, 165, 167, 174, 176, 178, 180, 207, 209, 214,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
HASN(103)GLN, PHE(104)GLU, ASP(105)PRO, ASP(100)GLY, TYR(101)SER, GLY(102)SER, ASN(103)GLN, ASP(105)PRO, THR(182)SER, ASN(218)ASP, GLN(3)LYS, GLN(5)LEU, GLN(6)GLU, PRO(14)SER, LYS(43)GLN, SER(55)ASN, ASN(57)GLU, THR(58)ILE, ASP(66)GLY, LYS(67)THR, SER(76)THR, ALA(97)ARG, -(98)ARG, ASP(100)GLY, TYR(101)SER, GLY(102)SER,
LNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

H:1QBL

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1QBL.ali
atm file:1QBL.atm
cof file:1QBL.cof
hbd file:1QBL.hbd
html file:1QBL.html
pdb file:1QBL.pdb
ps file:1QBL.ps
psa file:1QBL.psa
rtf file:1QBL.rtf
sst file:1QBL.sst
tem file:1QBL.tem