Conserved Domain Database Superfamily Annotations: 1Q08

No.	PDB ID	PSSM ID	CDD Accession	Superfamily Short Name	Linkout - CDD
1	1Q08	207663	cl02600	HTH_MerR-SF superfamily	N -

Structural Details of PDB entry 1Q08 PDBid Chains Hinge Swapped Domain 1Q08 A,B A:94-97,B:94-97 A:98-136,B:98-136 Swapped-domain interface residues and interactions: Chains Residues A 50, 53, 54, 57, 71, 74, 75, 77, 78, 79, 80, 82, 83, 86, 87, 90, 93, 94, 97, 100, 101, 103, 104, 106, 107, 108, 110, 111, 114, 115, 116, 117, 118, 119, 120, 121, 122, 124, 126, 127, 130, 131, 132, 133, 134, 136, B 50, 53, 54, 56, 57, 71, 74, 75, 77, 78, 79, 80, 82, 83, 86, 87, 90, 93, 94, 97, 100, 101, 103, 104, 106, 107, 108, 110, 111, 114, 115, 116, 117, 118, 119, 120, 121, 122, 124, 126, 127, 130, 131, 132, Non-swapped-domain interface residues and interactions: Chains Residues A 46, 56, 58, 67, 70, 89, 96, B 46, 49, 59, 67, 70, 89, 96,

Swapped domains are represented using trasperent spheres. Non-swapped part is represented using light color and cartoon representation. Hinge region is shown in yellow color.

Mutations in critical regions:

Chains	Hinge	Domain swapped interface	Non-swapped interface	Swapped Domain
A	No mutation	No mutation	No mutation	No mutation
B	No mutation	No mutation	No mutation	No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

A:1Q08

B:1Q08

JOY Structural annotation for hinge hinge and swapped domain:

Hinge	Swapped domain

JOY output:

ali file:	1Q08.ali
atm file:	1Q08.atm
cof file:	1Q08.cof
hbd file:	1Q08.hbd
html file:	1Q08.html
pdb file:	1Q08.pdb
ps file:	1Q08.ps
psa file:	1Q08.psa
rtf file:	1Q08.rtf
sst file:	1Q08.sst
tem file:	1Q08.tem