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Pfam Domains mapped on to the structure: 1PC6

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF05772 NinB protein PF05772 PF05772

Conserved Domain Database Superfamily Annotations: 1PC6

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1PC6 187425 cl14671 NinB superfamily - -
Structural Details of PDB entry 1PC6

Structural Details of PDB entry 1PC6

PDBid Chains Hinge Swapped Domain
1PC6 A,B A:81-83,B:81-83;A:100-103,B:100-103 A:84-99,B:84-99

Swapped-domain interface residues and interactions:

Chains Residues
A 71, 74, 75, 78, 79, 84, 86, 87, 88, 89, 95, 96, 97,
B 71, 74, 75, 78, 79, 84, 86, 87, 88, 89, 91, 95, 96, 97,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 1, 3, 4, 5, 6, 7, 8, 9, 11, 14, 17, 18, 20, 21, 22, 24, 26, 28, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 42, 43, 62, 63, 65, 67, 68, 70, 83, 100, 102, 106, 119, 141,
B 1, 2, 3, 4, 5, 6, 7, 8, 9, 11, 14, 17, 18, 20, 21, 22, 24, 26, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 43, 62, 63, 65, 67, 68, 70, 83, 100, 102, 103, 119,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1PC6 B:1PC6

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1PC6.ali
atm file:1PC6.atm
cof file:1PC6.cof
hbd file:1PC6.hbd
html file:1PC6.html
pdb file:1PC6.pdb
ps file:1PC6.ps
psa file:1PC6.psa
rtf file:1PC6.rtf
sst file:1PC6.sst
tem file:1PC6.tem