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Pfam Domains mapped on to the structure: 1P3Q

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 Q PF02845 CUE domain PF02845 PF02845
2 U PF00240 Ubiquitin family PF00240 PF00240

Conserved Domain Database Superfamily Annotations: 1P3Q

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1P3Q 176398 cd01803 Ubiquitin - cl00155
2 1P3Q 212176 cl00155 UBQ superfamily - -
3 1P3Q 212176 cl00155 UBQ superfamily - -
Structural Details of PDB entry 1P3Q

Structural Details of PDB entry 1P3Q

PDBid Chains Hinge Swapped Domain
1P3Q Q,R,V,U Q:434-437,R:434-437,V:434-437,U:434-437 Q:438-451,R:438-451,V:438-451,U:438-451

Swapped-domain interface residues and interactions:

Chains Residues
Q 412, 431, 435, 436, 437, 441, 442, 443, 444,
R 416, 431, 432, 435, 438, 439, 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451,
U 8, 44, 46, 47, 68,
V 70, 71, 73,

Non-swapped-domain interface residues and interactions:

Chains Residues
Q 408, 415, 416, 418, 420, 421, 422, 426, 427, 428, 429, 430, 433, 434,
R 420, 427, 430, 433, 434, 436, 437,
U 6, 42, 66, 70, 73,
V 8, 9, 34, 35, 36, 42, 44, 46, 47, 49, 68,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
QNo mutationNo mutationNo mutationNo mutation
RNo mutationNo mutationNo mutationNo mutation
VNo mutationNo mutationNo mutationNo mutation
UNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

Q:1P3Q R:1P3Q U:1P3Q V:1P3Q

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1P3Q.ali
atm file:1P3Q.atm
cof file:1P3Q.cof
hbd file:1P3Q.hbd
html file:1P3Q.html
pdb file:1P3Q.pdb
ps file:1P3Q.ps
psa file:1P3Q.psa
rtf file:1P3Q.rtf
sst file:1P3Q.sst
tem file:1P3Q.tem