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Pfam Domains mapped on to the structure: 1OQF

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF13714 Phosphoenolpyruvate phosphomutase PF13714 PF13714
2 A PF00463 Isocitrate lyase family PF00463 PF00463

Conserved Domain Database Superfamily Annotations: 1OQF

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1OQF 119340 cd00377 ICL_PEPM - cl00435
2 1OQF 212216 cl00435 ICL_KPHMT superfamily - -
3 1OQF 212216 cl00435 ICL_KPHMT superfamily - -
Structural Details of PDB entry 1OQF

Structural Details of PDB entry 1OQF

PDBid Chains Hinge Swapped Domain
1OQF A,D,C,B A:234-237,D:234-237,C:234-237,B:234-237 A:238-290,D:238-290,C:238-290,B:238-290

Swapped-domain interface residues and interactions:

Chains Residues
A 32, 33, 36, 50, 54, 55, 56, 123, 213, 218, 220, 221, 237, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 249, 250, 251, 253, 254, 257, 258, 259, 260, 263, 264, 265, 266, 267, 268, 269, 271, 272, 276, 278, 281, 282, 285, 286, 289, 290,
B 32, 33, 36, 54, 55, 56, 123, 125, 213, 218, 220, 221, 238, 239, 240, 241, 242, 243, 244, 245, 246, 247, 249, 250, 251, 253, 254, 257, 258, 259, 260, 263, 264, 265, 266, 267, 268, 269, 271, 272, 276, 278, 281, 282, 285, 286, 289,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 16, 20, 22, 26, 27, 28, 29, 37, 38, 51, 52, 53, 58, 60, 65, 68, 72, 76, 122, 125, 126, 211, 212, 214, 234,
B 16, 20, 22, 26, 27, 28, 29, 37, 38, 50, 51, 52, 53, 58, 60, 68, 72, 76, 122, 126, 212, 234, 237,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
DNo mutationNo mutationNo mutationNo mutation
CNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1OQF B:1OQF C:1OQF D:1OQF

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1OQF.ali
atm file:1OQF.atm
cof file:1OQF.cof
hbd file:1OQF.hbd
html file:1OQF.html
pdb file:1OQF.pdb
ps file:1OQF.ps
psa file:1OQF.psa
rtf file:1OQF.rtf
sst file:1OQF.sst
tem file:1OQF.tem