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Pfam Domains mapped on to the structure: 1OP5

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 K PF13927 Immunoglobulin domain PF13927 PF13927
2 K PF13927 Immunoglobulin domain PF13927 PF13927

Conserved Domain Database Superfamily Annotations: 1OP5

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1OP5 212623 cl11960 Ig superfamily - -
2 1OP5 143186 cd04985 IgC_CH1 - cl11960
3 1OP5 212623 cl11960 Ig superfamily - -
4 1OP5 212623 cl11960 Ig superfamily - -
Structural Details of PDB entry 1OP5

Structural Details of PDB entry 1OP5

PDBid Chains Hinge Swapped Domain
1OP5 H,M,K,L H:113-113,M:113-113,K:113-113,L:113-113 H:1-112,M:1-112,K:114-213,L:114-213

Swapped-domain interface residues and interactions:

Chains Residues
H 7, 8, 11, 17, 18, 19, 21, 33, 39, 43, 44, 45, 47, 50, 52, 54, 56, 57, 58, 68, 70, 71, 72, 74, 75, 77, 79, 81, 91, 95, 97, 98, 100, 101, 103, 105, 110, 122, 123, 124, 125, 174, 175,
K 42, 43, 44, 46, 94, 95, 96, 98, 99, 100, 116, 118, 119, 121, 122, 123, 124, 126, 127, 128, 129, 131, 133, 135, 137, 138, 160, 162, 163, 164, 167, 169, 174, 176, 178, 180, 183, 212,
L 43, 46, 94, 95, 96, 98, 100, 116, 118, 119, 121, 122, 123, 124, 126, 127, 128, 129, 131, 133, 135, 137, 138, 160, 162, 163, 164, 167, 169, 174, 176, 178, 183, 213,
M 7, 8, 10, 11, 17, 18, 19, 21, 33, 39, 42, 43, 44, 45, 47, 50, 52, 54, 56, 57, 58, 68, 70, 71, 72, 74, 75, 77, 79, 81, 91, 95, 97, 100, 101, 103, 104, 105, 108, 110, 122, 123, 124, 125, 174, 175,

Non-swapped-domain interface residues and interactions:

Chains Residues
H 137, 138, 139, 143, 145, 168, 169, 172, 177, 178, 179, 180, 182, 183, 188, 190, 192, 228, 229,
K 32, 36, 38, 40, 41, 49, 55, 85, 87, 89, 91, 92, 93,
L 32, 36, 38, 40, 41, 44, 49, 55, 85, 87, 89, 91, 93, 99,
M 127, 137, 138, 139, 143, 145, 168, 169, 172, 177, 178, 179, 180, 182, 183, 188, 190, 192, 221, 228, 229,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
HNo mutationNo mutationNo mutationNo mutation
MNo mutationNo mutationNo mutationNo mutation
KNo mutationNo mutationNo mutationNo mutation
LNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

H:1OP5 K:1OP5 L:1OP5 M:1OP5

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1OP5.ali
atm file:1OP5.atm
cof file:1OP5.cof
hbd file:1OP5.hbd
html file:1OP5.html
pdb file:1OP5.pdb
ps file:1OP5.ps
psa file:1OP5.psa
rtf file:1OP5.rtf
sst file:1OP5.sst
tem file:1OP5.tem