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Pfam Domains mapped on to the structure: 1NXM

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PF00908 PF00908

Conserved Domain Database Superfamily Annotations: 1NXM

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1NXM 212615 cl09118 Cupin_2 superfamily - -
Structural Details of PDB entry 1NXM

Structural Details of PDB entry 1NXM

PDBid Chains Hinge Swapped Domain
1NXM A,B A:26-28,B:26-28;A:29-42,B:29-42 A:29-28,B:29-28

Swapped-domain interface residues and interactions:

Chains Residues

Non-swapped-domain interface residues and interactions:

Chains Residues
A 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 58, 60, 61, 62, 63, 64, 65, 66, 68, 87, 88, 89, 135, 137, 139, 141, 145, 175, 197,
B 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 58, 60, 61, 62, 63, 64, 65, 66, 68, 87, 88, 89, 135, 137, 139, 141, 145,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1NXM B:1NXM

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1NXM.ali
atm file:1NXM.atm
cof file:1NXM.cof
hbd file:1NXM.hbd
html file:1NXM.html
pdb file:1NXM.pdb
ps file:1NXM.ps
psa file:1NXM.psa
rtf file:1NXM.rtf
sst file:1NXM.sst
tem file:1NXM.tem