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Pfam Domains mapped on to the structure: 1NKI

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PF00903 PF00903
2 A PF12681 Glyoxalase-like domain PF12681 PF12681

Conserved Domain Database Superfamily Annotations: 1NKI

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1NKI 176668 cd07244 FosA - cl14632
2 1NKI 211465 cl14632 Glo_EDI_BRP_like superfamily - -
3 1NKI 211465 cl14632 Glo_EDI_BRP_like superfamily - -
Structural Details of PDB entry 1NKI

Structural Details of PDB entry 1NKI

PDBid Chains Hinge Swapped Domain
1NKI A,B A:55-63,B:55-63 A:1-54,B:1-54

Swapped-domain interface residues and interactions:

Chains Residues
A 1, 2, 3, 4, 5, 6, 7, 8, 9, 11, 26, 29, 30, 31, 32, 33, 34, 35, 39, 41, 42, 43, 45, 46, 50, 52, 61, 62, 63, 64, 65, 66, 67, 68, 69, 73, 77, 115, 116, 128, 129, 130, 131, 132, 134,
B 1, 2, 3, 4, 5, 6, 7, 8, 9, 11, 26, 29, 30, 31, 32, 33, 34, 35, 39, 41, 42, 43, 45, 46, 50, 52, 61, 62, 63, 64, 65, 66, 67, 68, 69, 73, 115, 116, 128, 129, 130, 131, 132,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 55, 70, 112, 114, 117, 119, 120,
B 55, 70, 76, 77, 80, 110, 112, 114, 117, 119, 120,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1NKI B:1NKI

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1NKI.ali
atm file:1NKI.atm
cof file:1NKI.cof
hbd file:1NKI.hbd
html file:1NKI.html
pdb file:1NKI.pdb
ps file:1NKI.ps
psa file:1NKI.psa
rtf file:1NKI.rtf
sst file:1NKI.sst
tem file:1NKI.tem