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Conserved Domain Database Superfamily Annotations: 1MNU

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1MNU 212623 cl11960 Ig superfamily - -
2 1MNU 212623 cl11960 Ig superfamily - -
3 1MNU 212623 cl11960 Ig superfamily - -
Structural Details of PDB entry 1MNU

Structural Details of PDB entry 1MNU

PDBid Chains Hinge Swapped Domain
1MNU H,L H:42-45,L:46-49 H:1-41,L:1-45

Swapped-domain interface residues and interactions:

Chains Residues
H 35, 37, 39,
L 1, 37, 39, 41, 43,

Non-swapped-domain interface residues and interactions:

Chains Residues
H 44, 45, 47, 61, 63, 95, 99, 101, 102, 107, 109, 110, 111, 112, 113, 130, 131, 132, 133, 135, 136, 138, 145, 147, 149, 151, 172, 173, 174, 175, 177, 178, 179, 184, 186, 188, 216,
L 48, 49, 51, 54, 55, 60, 92, 99, 100, 101, 103, 105, 121, 122, 123, 124, 126, 128, 129, 132, 136, 138, 140, 142, 143, 165, 166, 167, 168, 169, 172, 179, 181, 183, 185, 214, 219,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
HNo mutationNo mutationNo mutationASN(3)-, GLN(6)-,
LNo mutationNo mutationNo mutationVAL(13)LEU,

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

H:1MNU

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1MNU.ali
atm file:1MNU.atm
cof file:1MNU.cof
hbd file:1MNU.hbd
html file:1MNU.html
pdb file:1MNU.pdb
ps file:1MNU.ps
psa file:1MNU.psa
rtf file:1MNU.rtf
sst file:1MNU.sst
tem file:1MNU.tem