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Pfam Domains mapped on to the structure: 1MLV

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00856 SET domain PF00856 PF00856

Conserved Domain Database Superfamily Annotations: 1MLV

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1MLV 204186 cl07783 Rubis-subs-bind superfamily - -
2 1MLV 207647 SET superfamily N -
Structural Details of PDB entry 1MLV

Structural Details of PDB entry 1MLV

PDBid Chains Hinge Swapped Domain
1MLV A,C,B A:459-464,C:459-464,B:459-464 A:465-486,C:465-487,B:465-488

Swapped-domain interface residues and interactions:

Chains Residues
A 123, 124, 172, 175, 176, 180, 313, 314, 315, 316, 342, 395, 399, 403, 407, 465, 466, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 485, 486,
B 123, 172, 175, 176, 180, 313, 314, 315, 316, 342, 365, 395, 399, 403, 407, 465, 466, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 485, 486, 487, 488,
C 123, 172, 175, 176, 180, 313, 314, 315, 316, 342, 365, 399, 403, 407, 465, 466, 468, 469, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 485, 486, 487,
D 260,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 118, 120, 121, 122, 125, 179, 183, 190, 194, 220, 295, 298, 312, 317, 319, 320, 322, 323, 329, 333, 336, 338, 339, 340, 344, 359, 362, 363, 365, 366, 367, 370, 375, 376, 398, 400, 402,
B 70, 72, 88, 91, 93, 94, 95, 124, 125, 179, 183, 216, 220, 229, 231, 256, 257, 258, 259, 260, 261, 262, 263, 264, 265, 267, 268, 295, 312, 317, 322, 323, 324, 344, 362, 363, 366, 367, 375, 398, 400,
C 125, 179, 183, 216, 220, 295, 312, 317, 321, 322, 323, 324, 344, 359, 362, 363, 366, 367, 370, 375, 376, 395, 398, 400, 402, 464,
D 70, 72, 88, 91, 93, 94, 95, 123, 124, 125, 172, 175, 176, 179, 180, 183, 216, 220, 229, 231, 256, 257, 258, 259, 261, 262, 263, 264, 265, 267, 268, 295, 312, 313, 314, 315, 316, 317, 322, 323, 324, 342, 344, 362, 363, 365, 366, 367, 375, 395, 398, 399, 400, 403, 407, 465, 466, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 485, 486, 487, 488,
E 118, 120, 121, 122, 123, 124, 125, 172, 175, 176, 179, 180, 183, 190, 194, 220, 295, 298, 312, 313, 314, 315, 316, 317, 319, 320, 322, 323, 329, 333, 336, 338, 339, 340, 342, 344, 359, 362, 363, 365, 366, 367, 370, 375, 376, 395, 398, 399, 400, 402, 403, 407, 465, 466, 468, 469, 470, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 485, 486,
F 123, 125, 172, 175, 176, 179, 180, 183, 216, 220, 295, 312, 313, 314, 315, 316, 317, 321, 322, 323, 324, 342, 344, 359, 362, 363, 365, 366, 367, 370, 375, 376, 395, 398, 399, 400, 402, 403, 407, 464, 465, 466, 468, 469, 472, 473, 474, 475, 476, 477, 478, 479, 480, 481, 482, 483, 485, 486,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
CNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1MLV F:1MLV

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1MLV.ali
atm file:1MLV.atm
pdb file:1MLV.pdb
psa file:1MLV.psa
sst file:1MLV.sst