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Pfam Domains mapped on to the structure: 1MD0

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00178 Ets-domain PF00178 PF00178

Gene Ontology Annotations: 1MD0

No. GO ID GO Description Linkout - AmiGO
1 GO:0006355 regulation of transcription, DNA-dependent GO:0006355

Conserved Domain Database Superfamily Annotations: 1MD0

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1MD0 198738 cl02599 Ets superfamily - -
Structural Details of PDB entry 1MD0

Structural Details of PDB entry 1MD0

PDBid Chains Hinge Swapped Domain
1MD0 A,B A:310-319,B:310-319 A:300-309,B:300-309

Swapped-domain interface residues and interactions:

Chains Residues
A 300, 301, 302, 303, 304, 305, 307, 326, 329, 420, 421, 422, 423,
B 300, 302, 303, 304, 305, 307, 326, 329, 420, 422, 423,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 320, 321, 325, 328, 424, 428, 437,
B 321, 322, 325, 328, 424,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1MD0 B:1MD0

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1MD0.ali
atm file:1MD0.atm
cof file:1MD0.cof
hbd file:1MD0.hbd
html file:1MD0.html
pdb file:1MD0.pdb
ps file:1MD0.ps
psa file:1MD0.psa
rtf file:1MD0.rtf
sst file:1MD0.sst
tem file:1MD0.tem