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Pfam Domains mapped on to the structure: 1M85

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00199 Catalase PF00199 PF00199

Conserved Domain Database Superfamily Annotations: 1M85

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1M85 163712 cd08156 catalase_clade_3 - cl09506
2 1M85 209025 cl09506 catalase_like superfamily - -
3 1M85 209025 cl09506 catalase_like superfamily - -
Structural Details of PDB entry 1M85

Structural Details of PDB entry 1M85

PDBid Chains Hinge Swapped Domain
1M85 A,B A:400-409,B:400-409 A:410-479,B:410-479

Swapped-domain interface residues and interactions:

Chains Residues
A 410, 411, 412, 451, 479,
B 410, 411, 412, 451, 479,
C 19, 21, 22, 25,
D 19, 21, 22, 25,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 52, 56, 98, 99, 100, 101, 102, 105, 119, 120, 121, 136, 137, 138, 139, 140, 141, 142, 145, 146, 149, 151, 152, 153, 154, 155, 160, 163, 164, 167, 168, 230, 233, 234, 235, 237, 238, 241, 242, 245, 268, 274, 276, 300, 301, 302, 303, 304, 305, 306, 310, 316, 317, 318, 320, 324, 326, 328, 331, 332, 334, 335, 336, 339, 340, 342, 343, 345, 346, 347, 348, 350, 351, 352, 353, 357, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 396, 397, 398, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409,
B 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 52, 56, 98, 99, 100, 101, 102, 105, 119, 120, 121, 136, 137, 138, 139, 140, 141, 142, 145, 146, 149, 151, 152, 153, 154, 155, 160, 163, 164, 167, 168, 230, 233, 234, 235, 237, 238, 241, 242, 245, 268, 274, 276, 300, 301, 302, 303, 304, 305, 306, 310, 316, 317, 318, 320, 324, 326, 328, 331, 332, 334, 335, 336, 339, 340, 342, 343, 345, 346, 347, 348, 350, 351, 352, 353, 357, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 396, 397, 398, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409,
C 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 20, 23, 24, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 52, 56, 98, 99, 100, 101, 102, 105, 119, 120, 121, 136, 137, 138, 139, 140, 141, 142, 145, 146, 149, 151, 152, 153, 154, 155, 160, 163, 164, 167, 168, 230, 233, 234, 235, 237, 238, 241, 242, 245, 268, 274, 276, 300, 301, 302, 303, 304, 305, 306, 310, 316, 317, 318, 320, 324, 326, 328, 331, 332, 334, 335, 336, 339, 340, 342, 343, 345, 346, 347, 348, 350, 351, 352, 353, 357, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 396, 397, 398, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 451, 479,
D 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 20, 23, 24, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 52, 56, 98, 99, 100, 101, 102, 105, 119, 120, 121, 136, 137, 138, 139, 140, 141, 142, 145, 146, 149, 151, 152, 153, 154, 155, 160, 163, 164, 167, 168, 230, 233, 234, 235, 237, 238, 241, 242, 245, 268, 274, 276, 300, 301, 302, 303, 304, 305, 306, 310, 316, 317, 318, 320, 324, 326, 328, 331, 332, 334, 335, 336, 339, 340, 342, 343, 345, 346, 347, 348, 350, 351, 352, 353, 357, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371, 372, 374, 375, 377, 378, 379, 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 396, 397, 398, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 451,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1M85 D:1M85

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1M85.ali
atm file:1M85.atm
cof file:1M85.cof
hbd file:1M85.hbd
html file:1M85.html
pdb file:1M85.pdb
ps file:1M85.ps
psa file:1M85.psa
rtf file:1M85.rtf
sst file:1M85.sst
tem file:1M85.tem