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Pfam Domains mapped on to the structure: 1LSU

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PF03446 PF03446
2 A PF02254 TrkA-N domain PF02254 PF02254
3 A PF13460 NADH(P)-binding PF13460 PF13460

Conserved Domain Database Superfamily Annotations: 1LSU

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1LSU 212616 cl09931 NADB_Rossmann superfamily - -
Structural Details of PDB entry 1LSU

Structural Details of PDB entry 1LSU

PDBid Chains Hinge Swapped Domain
1LSU A,B A:122-123,B:122-123 A:124-140,B:124-140

Swapped-domain interface residues and interactions:

Chains Residues
A 16, 17, 20, 21, 24, 25, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139, 140,
B 16, 17, 20, 21, 24, 25, 124, 125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 139,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 7, 9, 28, 30, 73, 75, 101, 103, 105, 122,
B 9, 28, 30, 73, 75, 101, 103, 105, 120, 122,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1LSU B:1LSU

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1LSU.ali
atm file:1LSU.atm
cof file:1LSU.cof
hbd file:1LSU.hbd
html file:1LSU.html
pdb file:1LSU.pdb
ps file:1LSU.ps
psa file:1LSU.psa
rtf file:1LSU.rtf
sst file:1LSU.sst
tem file:1LSU.tem