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Pfam Domains mapped on to the structure: 1LI4

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF05221 S-adenosyl-L-homocysteine hydrolase PF05221 PF05221
2 A PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PF00670 PF00670
3 A PF07991 Acetohydroxy acid isomeroreductase, catalytic domain PF07991 PF07991

Gene Ontology Annotations: 1LI4

No. GO ID GO Description Linkout - AmiGO
1 GO:0006730 one-carbon metabolic process GO:0006730

Conserved Domain Database Superfamily Annotations: 1LI4

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1LI4 29522 cd00401 AdoHcyase - cl09931
2 1LI4 212616 cl09931 NADB_Rossmann superfamily - -
3 1LI4 212616 cl09931 NADB_Rossmann superfamily - -
Structural Details of PDB entry 1LI4

Structural Details of PDB entry 1LI4

PDBid Chains Hinge Swapped Domain
1LI4 A,B A:402-410,B:402-410 A:411-432,B:411-432

Swapped-domain interface residues and interactions:

Chains Residues
A 245, 278, 279, 412, 413, 416, 417, 419, 425, 426, 427, 428, 429, 430, 431,
B 245, 278, 279, 412, 413, 416, 417, 419, 425, 426, 427, 428, 429, 430, 431,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 162, 165, 182, 184, 188, 189, 193, 196, 222, 223, 226, 243, 244, 246, 247, 248, 249, 250, 251, 253, 254, 255, 259, 260, 261, 264, 277, 280, 304, 356, 360, 385, 392, 395, 399, 402, 404, 405, 406, 407, 409,
B 162, 165, 182, 184, 188, 189, 193, 196, 222, 223, 226, 243, 244, 246, 247, 248, 249, 250, 251, 253, 254, 255, 259, 260, 261, 264, 277, 280, 304, 356, 360, 385, 392, 395, 399, 402, 404, 405, 406, 407, 409,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1LI4 B:1LI4

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1LI4.ali
atm file:1LI4.atm
cof file:1LI4.cof
hbd file:1LI4.hbd
html file:1LI4.html
pdb file:1LI4.pdb
ps file:1LI4.ps
psa file:1LI4.psa
rtf file:1LI4.rtf
sst file:1LI4.sst
tem file:1LI4.tem