Pfam Domains mapped on to the structure: 1L3A
No.
Chain ID
Pfam ID
Pfam Description
Linkout - Pfam
Linkout - CDD
1
A
PF08536
Whirly transcription factor
PF08536
PF08536
Conserved Domain Database Superfamily Annotations: 1L3A
Structural Details of PDB entry 1L3A
Structural Details of PDB entry 1L3A
PDBid
Chains
Hinge
Swapped Domain
1L3A
A,B
A:243-254,B:243-254
A:255-254,B:255-271
Swapped-domain interface residues and interactions:
Non-swapped-domain interface residues and interactions:
Chains
Residues
A
89 , 90 , 91 , 92 , 93 , 94 , 95 , 96 , 107 , 109 , 110 , 111 , 112 , 114 , 120 , 121 , 122 , 123 , 124 , 126 , 127 , 129 , 131 , 150 , 155 , 156 , 159 , 160 , 162 , 163 , 174 , 188 , 224 , 225 , 226 , 228 , 229 , 232 , 233 , 235 , 236 , 237 , 238 , 239 , 240 , 242 , 243 , 244 , 245 , 246 , 247 , 248 , 250 , 251 , 252 , 253 , 254 ,
B
89 , 90 , 91 , 92 , 93 , 94 , 95 , 96 , 107 , 109 , 110 , 111 , 112 , 114 , 116 , 117 , 120 , 121 , 122 , 123 , 124 , 126 , 127 , 129 , 131 , 141 , 148 , 150 , 152 , 155 , 156 , 159 , 160 , 162 , 163 , 168 , 174 , 176 , 177 , 182 , 186 , 188 , 207 , 209 , 211 , 212 , 224 , 225 , 226 , 228 , 229 , 232 , 233 , 235 , 236 , 237 , 238 , 239 , 240 , 242 , 243 , 244 , 245 , 246 , 247 , 248 , 249 , 250 , 251 , 252 , 253 , 254 ,
C
89 , 90 , 91 , 92 , 93 , 94 , 95 , 96 , 107 , 109 , 110 , 111 , 112 , 114 , 117 , 120 , 121 , 122 , 123 , 124 , 127 , 150 , 152 , 155 , 156 , 159 , 160 , 162 , 163 , 168 , 174 , 176 , 179 , 186 , 188 , 224 , 225 , 226 , 228 , 229 , 232 , 233 , 235 , 236 , 237 , 238 , 239 , 240 , 242 , 243 , 244 , 245 , 246 , 247 , 248 , 250 , 251 , 252 , 253 , 254 , 266 , 267 , 268 , 269 , 270 , 271 , 272 , 273 , 278 , 279 , 281 ,
D
89 , 90 , 91 , 92 , 93 , 94 , 95 , 96 , 107 , 109 , 111 , 112 , 114 , 117 , 120 , 121 , 122 , 123 , 124 , 127 , 155 , 156 , 159 , 160 , 162 , 163 , 168 , 224 , 225 , 226 , 228 , 229 , 232 , 233 , 235 , 236 , 237 , 238 , 239 , 240 , 242 , 243 , 244 , 245 , 246 , 247 , 248 , 249 , 250 , 251 , 252 , 253 , 254 , 268 , 270 ,
Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.
Mutations in critical regions:
Chains
Hinge
Domain swapped interface
Non-swapped interface
Swapped Domain
A No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output: