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Pfam Domains mapped on to the structure: 1KQP

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF02540 NAD synthase PF02540 PF02540

Conserved Domain Database Superfamily Annotations: 1KQP

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1KQP 30166 cd00553 NAD_synthase - cl00292
2 1KQP 206963 cl00292 AANH_like superfamily - -
3 1KQP 206963 cl00292 AANH_like superfamily - -
Structural Details of PDB entry 1KQP

Structural Details of PDB entry 1KQP

PDBid Chains Hinge Swapped Domain
1KQP A,B A:260-262,B:260-262 A:263-271,B:263-271

Swapped-domain interface residues and interactions:

Chains Residues
A 28, 177, 179, 182, 263, 264, 265, 266, 270, 271,
B 28, 177, 179, 182, 263, 264, 265, 266, 270,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 11, 24, 25, 31, 32, 35, 103, 104, 105, 106, 109, 110, 113, 114, 117, 118, 121, 122, 124, 126, 127, 130, 134, 137, 140, 141, 144, 145, 146, 148, 149, 150, 170, 171, 174, 175, 176, 257, 259, 261, 262,
B 11, 13, 24, 25, 31, 32, 35, 103, 104, 105, 106, 109, 110, 113, 114, 117, 118, 121, 122, 124, 126, 127, 130, 134, 137, 140, 141, 144, 145, 146, 148, 149, 150, 170, 171, 174, 175, 176, 257, 259, 260, 261, 262,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1KQP B:1KQP

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1KQP.ali
atm file:1KQP.atm
cof file:1KQP.cof
hbd file:1KQP.hbd
html file:1KQP.html
pdb file:1KQP.pdb
ps file:1KQP.ps
psa file:1KQP.psa
rtf file:1KQP.rtf
sst file:1KQP.sst
tem file:1KQP.tem