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Pfam Domains mapped on to the structure: 1K9U

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF13833 EF-hand domain pair PF13833 PF13833
2 A PF13833 EF-hand domain pair PF13833 PF13833
3 A PF00036 EF hand PF00036 PF00036
4 A PF00036 EF hand PF00036 PF00036
5 A PF13202 EF hand PF13202 PF13202
6 A PF13202 EF hand PF13202 PF13202

Conserved Domain Database Superfamily Annotations: 1K9U

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1K9U 28933 cd00051 EFh - cl08302
2 1K9U 208857 cl08302 EFh superfamily - -
3 1K9U 208857 cl08302 EFh superfamily - -
Structural Details of PDB entry 1K9U

Structural Details of PDB entry 1K9U

PDBid Chains Hinge Swapped Domain
1K9U A,B A:34-37,B:34-37 A:3-33,B:3-33

Swapped-domain interface residues and interactions:

Chains Residues
A 4, 5, 6, 8, 9, 11, 12, 18, 19, 20, 21, 22, 25, 26, 29, 30, 31, 32, 33, 34, 37, 40, 41, 42, 44, 54, 55, 56, 57, 71, 77, 78,
B 5, 6, 8, 9, 11, 12, 18, 19, 20, 21, 22, 25, 26, 28, 29, 30, 31, 32, 33, 40, 41, 54, 55, 56, 57,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 35, 39, 43, 46, 60, 61, 63, 64, 65, 66, 67, 68, 69, 70, 72, 73, 74, 75, 76,
B 35, 37, 39, 42, 43, 44, 46, 53, 60, 61, 63, 64, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1K9U B:1K9U

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1K9U.ali
atm file:1K9U.atm
cof file:1K9U.cof
hbd file:1K9U.hbd
html file:1K9U.html
pdb file:1K9U.pdb
ps file:1K9U.ps
psa file:1K9U.psa
rtf file:1K9U.rtf
sst file:1K9U.sst
tem file:1K9U.tem