Pfam Domains mapped on to the structure: 1K87
No.
Chain ID
Pfam ID
Pfam Description
Linkout - Pfam
Linkout - CDD
1
A
PF01619
Proline dehydrogenase
PF01619
PF01619
Gene Ontology Annotations: 1K87
Conserved Domain Database Superfamily Annotations: 1K87
Structural Details of PDB entry 1K87
Structural Details of PDB entry 1K87
PDBid
Chains
Hinge
Swapped Domain
1K87
A,B
A:137-141,B:137-141
A:87-136,B:87-136
Swapped-domain interface residues and interactions:
Chains
Residues
A
91 , 92 , 94 , 95 , 96 , 98 , 99 , 100 , 101 , 103 , 104 , 106 , 107 , 108 , 110 , 111 , 113 , 114 , 115 , 116 , 117 , 120 , 121 , 123 , 124 , 125 , 127 , 128 , 129 , 131 , 132 , 133 , 134 , 135 , 136 , 408 , 409 , 412 , 413 , 415 , 416 , 452 , 454 , 456 , 461 , 464 , 465 , 467 , 468 , 489 , 490 , 493 , 494 , 497 , 519 , 520 , 570 , 577 , 578 , 581 , 585 , 598 , 599 , 601 ,
B
91 , 92 , 94 , 95 , 96 , 98 , 99 , 100 , 101 , 103 , 104 , 106 , 107 , 108 , 110 , 111 , 113 , 114 , 115 , 116 , 117 , 120 , 121 , 123 , 124 , 125 , 127 , 128 , 129 , 131 , 132 , 133 , 134 , 135 , 136 , 408 , 409 , 412 , 413 , 415 , 416 , 452 , 454 , 456 , 461 , 464 , 465 , 467 , 468 , 489 , 490 , 493 , 494 , 497 , 519 , 520 , 570 , 577 , 578 , 581 , 585 , 598 , 599 , 601 ,
Non-swapped-domain interface residues and interactions:
Chains
Residues
A
138 , 141 , 142 , 145 , 149 , 213 , 273 , 274 , 277 , 278 , 375 , 378 , 381 , 382 , 411 , 419 , 450 , 451 , 457 , 471 , 472 , 498 , 523 , 529 , 530 , 531 , 533 , 573 , 575 , 583 , 588 , 589 , 597 , 612 ,
B
138 , 141 , 142 , 145 , 149 , 213 , 273 , 274 , 277 , 278 , 375 , 378 , 381 , 382 , 411 , 419 , 450 , 451 , 457 , 471 , 472 , 498 , 523 , 529 , 530 , 531 , 533 , 573 , 575 , 583 , 588 , 589 , 597 ,
Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.
Mutations in critical regions:
Chains
Hinge
Domain swapped interface
Non-swapped interface
Swapped Domain
A No mutation No mutation No mutation No mutation
B No mutation No mutation No mutation No mutation
HIDE output:
JMOL Visualization:
2D-plot:
JOY Structural annotation for hinge hinge and swapped domain:
JOY output: